RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 BAZ2AQ9UIF9 1905 aaKnown RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 ZNF831Q5JPB2 1677 aa19.77■□□□□ 0.76
NEK3-206ENST00000611833 PTPREP23469 700 aa19.77■□□□□ 0.76
NEK3-206ENST00000611833 E4F1Q66K89 784 aaPredicted RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 FBXO2Q9UK22 296 aaPredicted RBP19.77■□□□□ 0.76
NEK3-206ENST00000611833 CYP2D7A0A087X1C5 515 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 FOXN1O15353 648 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 TBC1D9BQ66K14 1250 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 CEP131Q9UPN4 1083 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 PCDHB6Q9Y5E3 794 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 DUOX1Q9NRD9 1551 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 MYH2Q9UKX2 1941 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 POLR2DO15514 142 aaKnown RBP19.76■□□□□ 0.75
NEK3-206ENST00000611833 GRIN1Q05586 938 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 ELOA2Q8IYF1 753 aaPredicted RBP19.76■□□□□ 0.75
NEK3-206ENST00000611833 FANCLQ9NW38 375 aa19.76■□□□□ 0.75
NEK3-206ENST00000611833 XBP1P17861 261 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 MDM2Q00987 491 aaPredicted RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 POSTNQ15063 836 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 ENAHQ8N8S7 591 aaPredicted RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 OXER1Q8TDS5 423 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 DPF2Q92785 391 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 BCL11BQ9C0K0 894 aaPredicted RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 CABP5Q9NP86 173 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 MYO1BO43795 1136 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 KLRK1P26718 216 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 GTF2E1P29083 439 aaPredicted RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 PPP2R5BQ15173 497 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 FAM98CQ17RN3 349 aaKnown RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 PPP1R13BQ96KQ4 1090 aa19.75■□□□□ 0.75
NEK3-206ENST00000611833 RNF26Q9BY78 433 aaPredicted RBP19.75■□□□□ 0.75
NEK3-206ENST00000611833 PSDA5PKW4 1024 aaPredicted RBP19.74■□□□□ 0.75
NEK3-206ENST00000611833 NAA30Q147X3 362 aaPredicted RBP19.74■□□□□ 0.75
NEK3-206ENST00000611833 SHISA4Q96DD7 197 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 ZSCAN10Q96SZ4 725 aaPredicted RBP19.74■□□□□ 0.75
NEK3-206ENST00000611833 BRIP1Q9BX63 1249 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 SERTAD1Q9UHV2 236 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 MYH6P13533 1939 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 KCNJ6P48051 423 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 CBX1P83916 185 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 PTF1AQ7RTS3 328 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 ZNF579Q8NAF0 562 aaKnown RBP19.74■□□□□ 0.75
NEK3-206ENST00000611833 ZMYND15Q9H091 742 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 MAN1B1Q9UKM7 699 aa19.74■□□□□ 0.75
NEK3-206ENST00000611833 SRPRBQ9Y5M8 271 aaKnown RBP19.74■□□□□ 0.75
NEK3-206ENST00000611833 PRDM1O75626 825 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 BMP6P22004 513 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 PDE4BQ07343 736 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 IFIT1BQ5T764 474 aaKnown RBP19.73■□□□□ 0.75
NEK3-206ENST00000611833 CATIPQ7Z7H3 387 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 SMARCE1Q969G3 411 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 CNTNAP4Q9C0A0 1308 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 FBXO33Q7Z6M2 555 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 PDILTQ8N807 584 aa19.73■□□□□ 0.75
NEK3-206ENST00000611833 TOP1P11387 765 aaKnown RBP19.72■□□□□ 0.75
NEK3-206ENST00000611833 CTR9Q6PD62 1173 aa19.72■□□□□ 0.75
NEK3-206ENST00000611833 VPS54Q9P1Q0 977 aa19.72■□□□□ 0.75
NEK3-206ENST00000611833 CGNQ9P2M7 1197 aaKnown RBP19.72■□□□□ 0.75
NEK3-206ENST00000611833 DACH1Q9UI36 760 aa19.72■□□□□ 0.75
NEK3-206ENST00000611833 ZNF215Q9UL58 517 aaPredicted RBP19.72■□□□□ 0.75
NEK3-206ENST00000611833 FGRP09769 529 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 PRR29P0C7W0 189 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 FUT2Q10981 343 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 PKN1Q16512 942 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 KANK3Q6NY19 840 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 VSTM4Q8IW00 320 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 NSUN4Q96CB9 384 aaKnown RBP19.71■□□□□ 0.75
NEK3-206ENST00000611833 RPS8P62241 208 aaKnown RBP19.71■□□□□ 0.75
NEK3-206ENST00000611833 EVX2Q03828 476 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 MLKLQ8NB16 471 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 NOL10Q9BSC4 688 aaKnown RBP19.71■□□□□ 0.75
NEK3-206ENST00000611833 CSRNP2Q9H175 543 aa19.71■□□□□ 0.75
NEK3-206ENST00000611833 SRP68Q9UHB9 627 aaKnown RBP19.71■□□□□ 0.75
NEK3-206ENST00000611833 TRIM75PA6NK02 468 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 SPDYE4A6NLX3 237 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 CCP110O43303 1012 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 CDK11BP21127 795 aaKnown RBP19.7■□□□□ 0.74
NEK3-206ENST00000611833 KRT2P35908 639 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 HSP90AA4PQ58FG1 418 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 SMAP1Q8IYB5 467 aaPredicted RBP19.7■□□□□ 0.74
NEK3-206ENST00000611833 GRAMD1CQ8IYS0 662 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 V9GY48 417 aaPredicted RBP19.7■□□□□ 0.74
NEK3-206ENST00000611833 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 USP17L12C9JPN9 530 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 TMEM232C9JQI7 657 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 USP17L21D6R901 530 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 SEMA3EO15041 775 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 PLEKHA8P1O95397 391 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 MECOMQ03112 1051 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 NT5DC1Q5TFE4 455 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 RBM28Q9NW13 759 aaKnown RBP19.7■□□□□ 0.74
NEK3-206ENST00000611833 TFCP2L1Q9NZI6 479 aa19.7■□□□□ 0.74
NEK3-206ENST00000611833 MYH13Q9UKX3 1938 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 FAM205CA6NFA0 338 aa19.69■□□□□ 0.74
NEK3-206ENST00000611833 PRPF3O43395 683 aaKnown RBP19.69■□□□□ 0.74
NEK3-206ENST00000611833 SARSP49591 514 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms