RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CYP2C8P10632 490 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 BACE1P56817 501 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 LACTBP83111 547 aaPredicted RBP23.25■■□□□ 1.31
TCF3-219ENST00000610756 GABPAQ06546 454 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 EXOC6Q8TAG9 804 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 CPA4Q9UI42 421 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 ZBTB21Q9ULJ3 1066 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 PTPN22Q9Y2R2 807 aa23.25■■□□□ 1.31
TCF3-219ENST00000610756 DOCK1Q14185 1865 aa23.24■■□□□ 1.31
TCF3-219ENST00000610756 ZFYP08048 801 aaPredicted RBP23.24■■□□□ 1.31
TCF3-219ENST00000610756 MX1P20591 662 aa23.24■■□□□ 1.31
TCF3-219ENST00000610756 KIF22Q14807 665 aa23.24■■□□□ 1.31
TCF3-219ENST00000610756 CERKLQ49MI3 558 aaPredicted RBP23.24■■□□□ 1.31
TCF3-219ENST00000610756 SIPA1L1O43166 1804 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 SALL3Q9BXA9 1300 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 C19orf81C9J6K1 198 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 RNF113AO15541 343 aaKnown RBP23.23■■□□□ 1.31
TCF3-219ENST00000610756 GNRH1P01148 92 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 RGS19P49795 217 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 HMGCS2P54868 508 aa23.23■■□□□ 1.31
TCF3-219ENST00000610756 SHROOM1Q2M3G4 852 aaPredicted RBP23.23■■□□□ 1.31
TCF3-219ENST00000610756 LRRFIP1Q32MZ4 808 aaKnown RBP23.23■■□□□ 1.31
TCF3-219ENST00000610756 USP17L10C9JJH3 530 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 GH2P01242 217 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 BCRP11274 1271 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 SHMT1P34896 483 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 TREML2Q5T2D2 321 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 SMC5Q8IY18 1101 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 STRBPQ96SI9 672 aaKnown RBP23.22■■□□□ 1.31
TCF3-219ENST00000610756 STAP2Q9UGK3 403 aa23.22■■□□□ 1.31
TCF3-219ENST00000610756 PABPC4Q13310 644 aaKnown RBP eCLIP23.21■■□□□ 1.312e-6■□□□□ 11.1
TCF3-219ENST00000610756 APPBP2Q92624 585 aa23.21■■□□□ 1.31
TCF3-219ENST00000610756 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
TCF3-219ENST00000610756 PNMA3Q9UL41 463 aa23.21■■□□□ 1.31
TCF3-219ENST00000610756 SLC4A4Q9Y6R1 1079 aa23.21■■□□□ 1.31
TCF3-219ENST00000610756 PHIPQ8WWQ0 1821 aa23.21■■□□□ 1.31
TCF3-219ENST00000610756 MTMR2Q13614 643 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 ABCB5Q2M3G0 1257 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 C12orf60Q5U649 245 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 OSBP2Q969R2 916 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 CABP5Q9NP86 173 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 SWAP70Q9UH65 585 aa23.2■■□□□ 1.3
TCF3-219ENST00000610756 MYH1P12882 1939 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 USP17L12C9JPN9 530 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 USP17L21D6R901 530 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 IGHDP01880 384 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 CYP2D6P10635 497 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 EVX2Q03828 476 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 ARHGAP39Q9C0H5 1083 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 TMOD4Q9NZQ9 345 aa23.19■■□□□ 1.3
TCF3-219ENST00000610756 HTTP42858 3142 aa23.18■■□□□ 1.3
TCF3-219ENST00000610756 HOXA7P31268 230 aaPredicted RBP23.18■■□□□ 1.3
TCF3-219ENST00000610756 PSMC4P43686 418 aa23.18■■□□□ 1.3
TCF3-219ENST00000610756 PDE1AP54750 535 aa23.18■■□□□ 1.3
TCF3-219ENST00000610756 GIMAP6Q6P9H5 292 aa23.18■■□□□ 1.3
TCF3-219ENST00000610756 AMOTL1Q8IY63 956 aa23.18■■□□□ 1.3
TCF3-219ENST00000610756 SMCR8Q8TEV9 937 aaPredicted RBP23.18■■□□□ 1.3
TCF3-219ENST00000610756 OSBPP22059 807 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 CTGFP29279 349 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 PRMT2P55345 433 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 RAB3GAP1Q15042 981 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 CTR9Q6PD62 1173 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 TRIM47Q96LD4 638 aa23.17■■□□□ 1.3
TCF3-219ENST00000610756 GSG1L2A8MUP6 293 aa23.16■■□□□ 1.3
TCF3-219ENST00000610756 HOXD10P28358 340 aa23.16■■□□□ 1.3
TCF3-219ENST00000610756 USP17L2Q6R6M4 530 aa23.16■■□□□ 1.3
TCF3-219ENST00000610756 DYNLL2Q96FJ2 89 aa23.16■■□□□ 1.3
TCF3-219ENST00000610756 ASCC2Q9H1I8 757 aaPredicted RBP23.16■■□□□ 1.3
TCF3-219ENST00000610756 EMILIN3Q9NT22 766 aa23.16■■□□□ 1.3
TCF3-219ENST00000610756 FMNL1O95466 1100 aaPredicted RBP23.15■■□□□ 1.3
TCF3-219ENST00000610756 GNAT2P19087 354 aa23.15■■□□□ 1.3
TCF3-219ENST00000610756 GUCY1A2P33402 732 aa23.15■■□□□ 1.3
TCF3-219ENST00000610756 GCLCP48506 637 aaPredicted RBP23.15■■□□□ 1.3
TCF3-219ENST00000610756 SBK1Q52WX2 424 aa23.15■■□□□ 1.3
TCF3-219ENST00000610756 FSD1Q9BTV5 496 aa23.15■■□□□ 1.3
TCF3-219ENST00000610756 CYP2D7A0A087X1C5 515 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 GPAA1O43292 621 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 USP14P54578 494 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 ARMC5Q96C12 935 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 C12orf42Q96LP6 360 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 CCDC17Q96LX7 622 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 LNPKQ9C0E8 428 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 KIAA1683Q9H0B3 1180 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 SRRDQ9UH36 339 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 PTPRFP10586 1907 aa23.14■■□□□ 1.3
TCF3-219ENST00000610756 PATL2C9JE40 543 aaKnown RBP23.13■■□□□ 1.29
TCF3-219ENST00000610756 CDK8P49336 464 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 NUCB1Q02818 461 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 SEPT2Q15019 361 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 ZMYM1Q5SVZ6 1142 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 B4GALNT3Q6L9W6 998 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 C16orf86Q6ZW13 317 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 CHD1LQ86WJ1 897 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 TICAM2Q86XR7 235 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 SLC44A5Q8NCS7 719 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 EVI5LQ96CN4 794 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 ARPP21Q9UBL0 812 aaPredicted RBP23.13■■□□□ 1.29
TCF3-219ENST00000610756 PTCH2Q9Y6C5 1203 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 ATAD5Q96QE3 1844 aa23.13■■□□□ 1.29
TCF3-219ENST00000610756 DDX60LQ5H9U9 1706 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms