RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 USP17L12C9JPN9 530 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 USP17L21D6R901 530 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 HIP1O00291 1037 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 NEFLP07196 543 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 RRP1BQ14684 758 aaKnown RBP17.1■□□□□ 0.33
HDDC2-206ENST00000608461 COL13A1Q5TAT6 717 aaPredicted RBP17.1■□□□□ 0.33
HDDC2-206ENST00000608461 CTR9Q6PD62 1173 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 CENPQQ7L2Z9 268 aaPredicted RBP17.1■□□□□ 0.33
HDDC2-206ENST00000608461 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
HDDC2-206ENST00000608461 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
HDDC2-206ENST00000608461 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
HDDC2-206ENST00000608461 C19orf81C9J6K1 198 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 M0R2C6 588 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 GPR25O00155 361 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 SHMT1P34896 483 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
HDDC2-206ENST00000608461 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 FAM43AQ8N2R8 423 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 CCDC17Q96LX7 622 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 ZBTB21Q9ULJ3 1066 aa17.09■□□□□ 0.33
HDDC2-206ENST00000608461 PTPRFP10586 1907 aa17.08■□□□□ 0.33
HDDC2-206ENST00000608461 APPP05067 770 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 SPP2Q13103 211 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 CRHR2Q13324 411 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 MOGSQ13724 837 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
HDDC2-206ENST00000608461 ABCB5Q2M3G0 1257 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 C16orf86Q6ZW13 317 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 IFNL3Q8IZI9 196 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
HDDC2-206ENST00000608461 TRIM75PA6NK02 468 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 TLR2O60603 784 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 FKTNO75072 461 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 GDF11O95390 407 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 GH2P01242 217 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 SDSP20132 328 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 PDE4AP27815 886 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 TDO2P48775 406 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 BACE1P56817 501 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 PABPC4Q13310 644 aaKnown RBP eCLIP17.07■□□□□ 0.32
HDDC2-206ENST00000608461 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
HDDC2-206ENST00000608461 SEC62Q99442 399 aaKnown RBP17.07■□□□□ 0.32
HDDC2-206ENST00000608461 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 PDHXO00330 501 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 CDK8P49336 464 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 TTC22Q5TAA0 569 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 GPAT2Q6NUI2 795 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 ZNF296Q8WUU4 475 aaPredicted RBP17.06■□□□□ 0.32
HDDC2-206ENST00000608461 PARK7Q99497 189 aaKnown RBP17.06■□□□□ 0.32
HDDC2-206ENST00000608461 NAPBQ9H115 298 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 CASP8AP2Q9UKL3 1982 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 MYH8P13535 1937 aa17.06■□□□□ 0.32
HDDC2-206ENST00000608461 SLC3A2P08195 630 aaKnown RBP17.05■□□□□ 0.32
HDDC2-206ENST00000608461 CYP2D6P10635 497 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 USP14P54578 494 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 JAG1P78504 1218 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 ARHGEF6Q15052 776 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 ALX1Q15699 326 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 EPB41L4AQ9HCS5 686 aaPredicted RBP17.05■□□□□ 0.32
HDDC2-206ENST00000608461 PNMA3Q9UL41 463 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 LOC285556D6RIA3 1793 aa17.05■□□□□ 0.32
HDDC2-206ENST00000608461 ZMYM6O95789 1325 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 SP3Q02447 781 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 RAB3GAP1Q15042 981 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
HDDC2-206ENST00000608461 GADL1Q6ZQY3 521 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 DYNLL2Q96FJ2 89 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 R3HDMLQ9H3Y0 253 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 TMOD4Q9NZQ9 345 aa17.04■□□□□ 0.32
HDDC2-206ENST00000608461 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.04■□□□□ 0.32
HDDC2-206ENST00000608461 CYP2D7A0A087X1C5 515 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 MINDY4BA8MYZ0 360 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 HMGCS2P54868 508 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 PDE4BQ07343 736 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 NMIQ13287 307 aaPredicted RBP17.03■□□□□ 0.32
HDDC2-206ENST00000608461 MTMR2Q13614 643 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
HDDC2-206ENST00000608461 TNS4Q8IZW8 715 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 C12orf42Q96LP6 360 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
HDDC2-206ENST00000608461 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
HDDC2-206ENST00000608461 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
HDDC2-206ENST00000608461 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
HDDC2-206ENST00000608461 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
HDDC2-206ENST00000608461 CTU1Q7Z7A3 348 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms