RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PRIMPOLQ96LW4 560 aa26.14■■□□□ 1.77
SRRM1-222ENST00000596378 FAM205CA6NFA0 338 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 UBAP1LF5GYI3 381 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 RGL2O15211 777 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 FOXN1O15353 648 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 NCAPHQ15003 741 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 ANKRD2Q9GZV1 360 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 DYNC1I1O14576 645 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 DCP1AQ9NPI6 582 aaPredicted RBP26.13■■□□□ 1.77
SRRM1-222ENST00000596378 TUBE1Q9UJT0 475 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 USP21Q9UK80 565 aa26.13■■□□□ 1.77
SRRM1-222ENST00000596378 PKN1Q16512 942 aa26.12■■□□□ 1.77
SRRM1-222ENST00000596378 FAM47AQ5JRC9 791 aa26.12■■□□□ 1.77
SRRM1-222ENST00000596378 RNF26Q9BY78 433 aaPredicted RBP26.12■■□□□ 1.77
SRRM1-222ENST00000596378 CABP5Q9NP86 173 aa26.12■■□□□ 1.77
SRRM1-222ENST00000596378 FBXO2Q9UK22 296 aaPredicted RBP26.12■■□□□ 1.77
SRRM1-222ENST00000596378 FUT2Q10981 343 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 CATIPQ7Z7H3 387 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 IQCA1Q86XH1 822 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 C16orf45Q96MC5 204 aaPredicted RBP26.11■■□□□ 1.77
SRRM1-222ENST00000596378 NHSQ6T4R5 1651 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 RRP9O43818 475 aaKnown RBP26.11■■□□□ 1.77
SRRM1-222ENST00000596378 RILPL1Q5EBL4 403 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 KRBA2Q6ZNG9 492 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 FOXP4Q8IVH2 680 aaPredicted RBP26.11■■□□□ 1.77
SRRM1-222ENST00000596378 FNBP4Q8N3X1 1017 aaPredicted RBP26.11■■□□□ 1.77
SRRM1-222ENST00000596378 CNNM3Q8NE01 707 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 XPO4Q9C0E2 1151 aaKnown RBP26.11■■□□□ 1.77
SRRM1-222ENST00000596378 IFNKQ9P0W0 207 aa26.11■■□□□ 1.77
SRRM1-222ENST00000596378 SMC2O95347 1197 aa26.1■■□□□ 1.77
SRRM1-222ENST00000596378 FGRP09769 529 aa26.1■■□□□ 1.77
SRRM1-222ENST00000596378 AKAP17AQ02040 695 aaKnown RBP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 V9GY48 417 aaPredicted RBP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 LMOD1P29536 600 aaPredicted RBP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 TROAPQ12815 778 aa26.1■■□□□ 1.77
SRRM1-222ENST00000596378 EARS2Q5JPH6 523 aaKnown RBP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 CRNKL1Q9BZJ0 848 aaKnown RBP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.1■■□□□ 1.77
SRRM1-222ENST00000596378 TAF1LQ8IZX4 1826 aa26.09■■□□□ 1.77
SRRM1-222ENST00000596378 DLEC1Q9Y238 1755 aa26.09■■□□□ 1.77
SRRM1-222ENST00000596378 EP400Q96L91 3159 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 BAZ2BQ9UIF8 2168 aaKnown RBP26.08■■□□□ 1.77
SRRM1-222ENST00000596378 PTPREP23469 700 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 HSD3B7Q9H2F3 369 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 LAMB1P07942 1786 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 PDS5AQ29RF7 1337 aaKnown RBP26.08■■□□□ 1.77
SRRM1-222ENST00000596378 IRS2Q9Y4H2 1338 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 CCDC88AQ3V6T2 1871 aa26.08■■□□□ 1.77
SRRM1-222ENST00000596378 ATP1A3P13637 1013 aa26.08■■□□□ 1.76
SRRM1-222ENST00000596378 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.76
SRRM1-222ENST00000596378 PCDHA5Q9Y5H7 936 aa26.08■■□□□ 1.76
SRRM1-222ENST00000596378 RFC4P35249 363 aa26.07■■□□□ 1.76
SRRM1-222ENST00000596378 ANKIB1Q9P2G1 1089 aa26.07■■□□□ 1.76
SRRM1-222ENST00000596378 THSD7AQ9UPZ6 1657 aa26.07■■□□□ 1.76
SRRM1-222ENST00000596378 SKILP12757 684 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 CCZ1BP86790 482 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 CCZ1P86791 482 aaPredicted RBP26.06■■□□□ 1.76
SRRM1-222ENST00000596378 NOM1Q5C9Z4 860 aaKnown RBP26.06■■□□□ 1.76
SRRM1-222ENST00000596378 USP49Q70CQ1 688 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 USP27XA6NNY8 438 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 POLR2DO15514 142 aaKnown RBP26.06■■□□□ 1.76
SRRM1-222ENST00000596378 PRPF3O43395 683 aaKnown RBP26.06■■□□□ 1.76
SRRM1-222ENST00000596378 NFIXQ14938 502 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 PPP2R5BQ15173 497 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 DZIP1Q86YF9 867 aaKnown RBP26.06■■□□□ 1.76
SRRM1-222ENST00000596378 PDILTQ8N807 584 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 PHF20Q9BVI0 1012 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 KIAA1551Q9HCM1 1747 aa26.06■■□□□ 1.76
SRRM1-222ENST00000596378 SMTNL1A8MU46 457 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 USP17L8P0C7I0 530 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 GRAMD1CQ8IYS0 662 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 MAST2Q6P0Q8 1798 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 WNT7AO00755 349 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 RIOK3O14730 519 aaKnown RBP26.05■■□□□ 1.76
SRRM1-222ENST00000596378 PRR29P0C7W0 189 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 BMP6P22004 513 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 MDM2Q00987 491 aaPredicted RBP26.05■■□□□ 1.76
SRRM1-222ENST00000596378 TMTC3Q6ZXV5 915 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 TMC6Q7Z403 805 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 SERTAD1Q9UHV2 236 aa26.05■■□□□ 1.76
SRRM1-222ENST00000596378 ORC4O43929 436 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 PCP11498 1178 aaKnown RBP26.04■■□□□ 1.76
SRRM1-222ENST00000596378 TPD52L1Q16890 204 aaPredicted RBP26.04■■□□□ 1.76
SRRM1-222ENST00000596378 FAM196AQ6ZSG2 479 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 CSRNP2Q9H175 543 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 ATP8A2Q9NTI2 1148 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 RBM28Q9NW13 759 aaKnown RBP26.04■■□□□ 1.76
SRRM1-222ENST00000596378 MCM9Q9NXL9 1143 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 IKBKBO14920 756 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 KRT2P35908 639 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 TPM4P67936 248 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 GRIK5Q16478 980 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 TRAPPC3LQ5T215 181 aa26.04■■□□□ 1.76
SRRM1-222ENST00000596378 SRBD1Q8N5C6 995 aaKnown RBP26.04■■□□□ 1.76
SRRM1-222ENST00000596378 LY75O60449 1722 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 XBP1P17861 261 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 FANCCQ00597 558 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 PDE4BQ07343 736 aa26.03■■□□□ 1.76
SRRM1-222ENST00000596378 SRPRBQ9Y5M8 271 aaKnown RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms