RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
CACTIN-206ENST00000588749 SALL3Q9BXA9 1300 aa17.46■□□□□ 0.38
CACTIN-206ENST00000588749 ZSWIM8A7E2V4 1837 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 GH2P01242 217 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 CYP2C8P10632 490 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 CYP2D6P10635 497 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 HMGCS2P54868 508 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 CAP1Q01518 475 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 TATDN1Q6P1N9 297 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 FBXO46Q6PJ61 603 aaPredicted RBP17.45■□□□□ 0.38
CACTIN-206ENST00000588749 EFCC1Q9HA90 598 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 GINM1Q9NU53 330 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 ADGRA2Q96PE1 1338 aa17.45■□□□□ 0.38
CACTIN-206ENST00000588749 RNF113AO15541 343 aaKnown RBP17.44■□□□□ 0.38
CACTIN-206ENST00000588749 SHMT1P34896 483 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 MTMR2Q13614 643 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 TREML2Q5T2D2 321 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 SMC5Q8IY18 1101 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 APPBP2Q92624 585 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 DDRGK1Q96HY6 314 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 WDR18Q9BV38 432 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 LNPKQ9C0E8 428 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 AGTPBP1Q9UPW5 1226 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
CACTIN-206ENST00000588749 MYH8P13535 1937 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 ECM2O94769 699 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 IGHDP01880 384 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 ZFYP08048 801 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 LACTBP83111 547 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 GABPAQ06546 454 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 B4GALNT3Q6L9W6 998 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 PROCA1Q8NCQ7 364 aaPredicted RBP17.43■□□□□ 0.38
CACTIN-206ENST00000588749 OSBP2Q969R2 916 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
CACTIN-206ENST00000588749 PDE1AP54750 535 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 BACE1P56817 501 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 KIF22Q14807 665 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 LRRFIP1Q32MZ4 808 aaKnown RBP17.42■□□□□ 0.38
CACTIN-206ENST00000588749 AMOTL1Q8IY63 956 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 SMCR8Q8TEV9 937 aaPredicted RBP17.42■□□□□ 0.38
CACTIN-206ENST00000588749 STRBPQ96SI9 672 aaKnown RBP17.42■□□□□ 0.38
CACTIN-206ENST00000588749 ARHGAP39Q9C0H5 1083 aa17.42■□□□□ 0.38
CACTIN-206ENST00000588749 CYP2D7A0A087X1C5 515 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 USP17L21D6R901 530 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 ARHGEF6Q15052 776 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 DYNLL2Q96FJ2 89 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 TMOD4Q9NZQ9 345 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 STAP2Q9UGK3 403 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
CACTIN-206ENST00000588749 USP17L10C9JJH3 530 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 M0R2C6 588 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 GPAA1O43292 621 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 BCRP11274 1271 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 FEZ1Q99689 392 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 CABP5Q9NP86 173 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
CACTIN-206ENST00000588749 C19orf81C9J6K1 198 aa17.39■□□□□ 0.37
CACTIN-206ENST00000588749 SMIM22K7EJ46 135 aa17.39■□□□□ 0.37
CACTIN-206ENST00000588749 MPHOSPH10O00566 681 aaKnown RBP17.39■□□□□ 0.37
CACTIN-206ENST00000588749 PABPC4Q13310 644 aaKnown RBP eCLIP17.39■□□□□ 0.37
CACTIN-206ENST00000588749 C12orf60Q5U649 245 aa17.39■□□□□ 0.37
CACTIN-206ENST00000588749 SWAP70Q9UH65 585 aa17.39■□□□□ 0.37
CACTIN-206ENST00000588749 HTTP42858 3142 aa17.38■□□□□ 0.37
CACTIN-206ENST00000588749 CTGFP29279 349 aa17.38■□□□□ 0.37
CACTIN-206ENST00000588749 PSMC4P43686 418 aa17.38■□□□□ 0.37
CACTIN-206ENST00000588749 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
CACTIN-206ENST00000588749 CTR9Q6PD62 1173 aa17.38■□□□□ 0.37
CACTIN-206ENST00000588749 CHD1LQ86WJ1 897 aa17.38■□□□□ 0.37
CACTIN-206ENST00000588749 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
CACTIN-206ENST00000588749 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
CACTIN-206ENST00000588749 ARPP21Q9UBL0 812 aaPredicted RBP17.38■□□□□ 0.37
CACTIN-206ENST00000588749 MGAMO43451 1857 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 GSG1L2A8MUP6 293 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
CACTIN-206ENST00000588749 GNAT2P19087 354 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 OSBPP22059 807 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 GUCY1A2P33402 732 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 SOX10P56693 466 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 IRX3P78415 501 aaPredicted RBP17.37■□□□□ 0.37
CACTIN-206ENST00000588749 NUCB1Q02818 461 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 SEPT2Q15019 361 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 ACER1Q8TDN7 264 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 TRIM47Q96LD4 638 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 PTCH2Q9Y6C5 1203 aa17.37■□□□□ 0.37
CACTIN-206ENST00000588749 APPP05067 770 aa17.36■□□□□ 0.37
CACTIN-206ENST00000588749 AKR1B1P15121 316 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms