RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 LHX8Q68G74 356 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 PI16Q6UXB8 463 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 GPR142Q7Z601 462 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 PLEKHH3Q7Z736 793 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 PORCNQ9H237 461 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 PRKAG2Q9UGJ0 569 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 HERC5Q9UII4 1024 aaKnown RBP15.06■□□□□ 0
PRPF8-208ENST00000573716 NDUFB9Q9Y6M9 179 aa15.06■□□□□ 0
PRPF8-208ENST00000573716 ANP32CO43423 234 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 GDF11O95390 407 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 CNGA1P29973 690 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 ERVK-9P63128 1117 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 ERVK-24P63145 666 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 TFCP2Q12800 502 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 SHROOM1Q2M3G4 852 aaPredicted RBP15.05■□□□□ -0
PRPF8-208ENST00000573716 Q3C1V9 767 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 FAM109BQ6ICB4 259 aaPredicted RBP15.05■□□□□ -0
PRPF8-208ENST00000573716 CRACR2BQ8N4Y2 399 aaPredicted RBP15.05■□□□□ -0
PRPF8-208ENST00000573716 SH3RF3Q8TEJ3 882 aaPredicted RBP15.05■□□□□ -0
PRPF8-208ENST00000573716 APBA2Q99767 749 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 WDR18Q9BV38 432 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 SMC4Q9NTJ3 1288 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 HMG20BQ9P0W2 317 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 RBPJLQ9UBG7 517 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 AKAP2Q9Y2D5 859 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 COL2A1P02458 1487 aaPredicted RBP15.05■□□□□ -0
PRPF8-208ENST00000573716 MAST2Q6P0Q8 1798 aa15.05■□□□□ -0
PRPF8-208ENST00000573716 SIPA1L1O43166 1804 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 ASNSP08243 561 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 HOXA7P31268 230 aaPredicted RBP15.04■□□□□ -0
PRPF8-208ENST00000573716 SPATA5Q8NB90 893 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
PRPF8-208ENST00000573716 COPRSQ9NQ92 184 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 LRP2BPQ9P2M1 347 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 PI4KBQ9UBF8 816 aa15.04■□□□□ -0
PRPF8-208ENST00000573716 C19orf81C9J6K1 198 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 USP17L10C9JJH3 530 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 MAP4K4O95819 1239 aaPredicted RBP15.03■□□□□ -0
PRPF8-208ENST00000573716 JAG1P78504 1218 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 MORN1Q5T089 497 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 MAPKAPK5Q8IW41 473 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 MAFAQ8NHW3 353 aaPredicted RBP15.03■□□□□ -0
PRPF8-208ENST00000573716 USP6NLQ92738 828 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 CDX2Q99626 313 aaPredicted RBP15.03■□□□□ -0
PRPF8-208ENST00000573716 HDAC5Q9UQL6 1122 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 ATP11BQ9Y2G3 1177 aa15.03■□□□□ -0
PRPF8-208ENST00000573716 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
PRPF8-208ENST00000573716 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
PRPF8-208ENST00000573716 RTP1P59025 263 aa15.02■□□□□ -0
PRPF8-208ENST00000573716 MAP2K5Q13163 448 aa15.02■□□□□ -0
PRPF8-208ENST00000573716 ZYXQ15942 572 aaKnown RBP15.02■□□□□ -0
PRPF8-208ENST00000573716 EDC3Q96F86 508 aaKnown RBP15.02■□□□□ -0
PRPF8-208ENST00000573716 PRDM5Q9NQX1 630 aaPredicted RBP15.02■□□□□ -0
PRPF8-208ENST00000573716 AATFQ9NY61 560 aaKnown RBP eCLIP15.02■□□□□ -0
PRPF8-208ENST00000573716 ATP2B2Q01814 1243 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
PRPF8-208ENST00000573716 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 FEZ1Q99689 392 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 DHX36Q9H2U1 1008 aaKnown RBP15.01□□□□□ -0.01
PRPF8-208ENST00000573716 SAP30BPQ9UHR5 308 aaKnown RBP15.01□□□□□ -0.01
PRPF8-208ENST00000573716 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 LTBP2Q14767 1821 aa15.01□□□□□ -0.01
PRPF8-208ENST00000573716 ZNF521Q96K83 1311 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 E9PSI1 815 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 SRGAP3O43295 1099 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 BAG3O95817 575 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 CCNA1P78396 465 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 SHHQ15465 462 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 USP17L2Q6R6M4 530 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 MYLIPQ8WY64 445 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 MEIS3Q99687 375 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 DNAJC18Q9H819 358 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 SNRKQ9NRH2 765 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 EMILIN3Q9NT22 766 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 FLRT1Q9NZU1 646 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 DDX20Q9UHI6 824 aaKnown RBP15□□□□□ -0.01
PRPF8-208ENST00000573716 PALD1Q9ULE6 856 aa15□□□□□ -0.01
PRPF8-208ENST00000573716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15□□□□□ -0.01
PRPF8-208ENST00000573716 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
PRPF8-208ENST00000573716 C9orf50Q5SZB4 431 aa14.99□□□□□ -0.01
PRPF8-208ENST00000573716 GJC2Q5T442 439 aaPredicted RBP14.99□□□□□ -0.01
PRPF8-208ENST00000573716 NAA16Q6N069 864 aaPredicted RBP14.99□□□□□ -0.01
PRPF8-208ENST00000573716 SEMA6BQ9H3T3 888 aa14.99□□□□□ -0.01
PRPF8-208ENST00000573716 NOB1Q9ULX3 412 aaKnown RBP14.99□□□□□ -0.01
PRPF8-208ENST00000573716 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
PRPF8-208ENST00000573716 DNAH12Q6ZR08 3092 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 FLT1P17948 1338 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 SLC15A5A6NIM6 579 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 PLCG2P16885 1265 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 CYP2C19P33261 490 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 MCAMP43121 646 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 POTEEQ6S8J3 1075 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 FOXP4Q8IVH2 680 aaPredicted RBP14.98□□□□□ -0.01
PRPF8-208ENST00000573716 LPAR1Q92633 364 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 PRDM6Q9NQX0 595 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 RABGAP1Q9Y3P9 1069 aa14.98□□□□□ -0.01
PRPF8-208ENST00000573716 FOCADQ5VW36 1801 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms