RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 PROCA1Q8NCQ7 364 aaPredicted RBP22.93■■□□□ 1.26
TRADD-203ENST00000563348 EXOC6Q8TAG9 804 aa22.93■■□□□ 1.26
TRADD-203ENST00000563348 PI4K2BQ8TCG2 481 aa22.93■■□□□ 1.26
TRADD-203ENST00000563348 PUS7LQ9H0K6 701 aaKnown RBP22.93■■□□□ 1.26
TRADD-203ENST00000563348 AGTPBP1Q9UPW5 1226 aa22.93■■□□□ 1.26
TRADD-203ENST00000563348 PTPN22Q9Y2R2 807 aa22.93■■□□□ 1.26
TRADD-203ENST00000563348 MYH1P12882 1939 aa22.92■■□□□ 1.26
TRADD-203ENST00000563348 PHIPQ8WWQ0 1821 aa22.92■■□□□ 1.26
TRADD-203ENST00000563348 LACTBP83111 547 aaPredicted RBP22.92■■□□□ 1.26
TRADD-203ENST00000563348 GABPAQ06546 454 aa22.92■■□□□ 1.26
TRADD-203ENST00000563348 RWDD1Q9H446 243 aaPredicted RBP22.92■■□□□ 1.26
TRADD-203ENST00000563348 RNF113AO15541 343 aaKnown RBP22.91■■□□□ 1.26
TRADD-203ENST00000563348 GH2P01242 217 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 MX1P20591 662 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 HMGCS2P54868 508 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 BACE1P56817 501 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 KIF22Q14807 665 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 CERKLQ49MI3 558 aaPredicted RBP22.91■■□□□ 1.26
TRADD-203ENST00000563348 TREML2Q5T2D2 321 aa22.91■■□□□ 1.26
TRADD-203ENST00000563348 SALL3Q9BXA9 1300 aa22.9■■□□□ 1.26
TRADD-203ENST00000563348 ZFYP08048 801 aaPredicted RBP22.9■■□□□ 1.26
TRADD-203ENST00000563348 BCRP11274 1271 aa22.9■■□□□ 1.26
TRADD-203ENST00000563348 SHMT1P34896 483 aa22.9■■□□□ 1.26
TRADD-203ENST00000563348 TAOK2Q9UL54 1235 aa22.9■■□□□ 1.26
TRADD-203ENST00000563348 C19orf81C9J6K1 198 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 USP17L10C9JJH3 530 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 CYP2D6P10635 497 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 RGS19P49795 217 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 EVX2Q03828 476 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 SMC5Q8IY18 1101 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 APPBP2Q92624 585 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 STRBPQ96SI9 672 aaKnown RBP22.89■■□□□ 1.25
TRADD-203ENST00000563348 ARHGAP39Q9C0H5 1083 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 SLC4A4Q9Y6R1 1079 aa22.89■■□□□ 1.25
TRADD-203ENST00000563348 GNRH1P01148 92 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 PABPC4Q13310 644 aaKnown RBP eCLIP22.88■■□□□ 1.25
TRADD-203ENST00000563348 MTMR2Q13614 643 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 ABCB5Q2M3G0 1257 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 LRRFIP1Q32MZ4 808 aaKnown RBP22.88■■□□□ 1.25
TRADD-203ENST00000563348 OSBP2Q969R2 916 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 CABP5Q9NP86 173 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 STAP2Q9UGK3 403 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 PNMA3Q9UL41 463 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 PTPRFP10586 1907 aa22.88■■□□□ 1.25
TRADD-203ENST00000563348 USP17L12C9JPN9 530 aa22.87■■□□□ 1.25
TRADD-203ENST00000563348 USP17L21D6R901 530 aa22.87■■□□□ 1.25
TRADD-203ENST00000563348 SMCR8Q8TEV9 937 aaPredicted RBP22.87■■□□□ 1.25
TRADD-203ENST00000563348 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
TRADD-203ENST00000563348 TMOD4Q9NZQ9 345 aa22.87■■□□□ 1.25
TRADD-203ENST00000563348 SWAP70Q9UH65 585 aa22.87■■□□□ 1.25
TRADD-203ENST00000563348 IGHDP01880 384 aa22.86■■□□□ 1.25
TRADD-203ENST00000563348 CTGFP29279 349 aa22.86■■□□□ 1.25
TRADD-203ENST00000563348 PSMC4P43686 418 aa22.86■■□□□ 1.25
TRADD-203ENST00000563348 C12orf60Q5U649 245 aa22.86■■□□□ 1.25
TRADD-203ENST00000563348 ATAD5Q96QE3 1844 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 OSBPP22059 807 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 HOXA7P31268 230 aaPredicted RBP22.85■■□□□ 1.25
TRADD-203ENST00000563348 PDE1AP54750 535 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 RAB3GAP1Q15042 981 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 AMOTL1Q8IY63 956 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 DYNLL2Q96FJ2 89 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 TRIM47Q96LD4 638 aa22.85■■□□□ 1.25
TRADD-203ENST00000563348 FMNL1O95466 1100 aaPredicted RBP22.84■■□□□ 1.25
TRADD-203ENST00000563348 GUCY1A2P33402 732 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 PRMT2P55345 433 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 GIMAP6Q6P9H5 292 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 CTR9Q6PD62 1173 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 USP17L2Q6R6M4 530 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 SLC44A5Q8NCS7 719 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 ASCC2Q9H1I8 757 aaPredicted RBP22.84■■□□□ 1.25
TRADD-203ENST00000563348 EMILIN3Q9NT22 766 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 MYH7P12883 1935 aa22.84■■□□□ 1.25
TRADD-203ENST00000563348 DDX60LQ5H9U9 1706 aaKnown RBP22.83■■□□□ 1.25
TRADD-203ENST00000563348 CYP2D7A0A087X1C5 515 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 GSG1L2A8MUP6 293 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 GPAA1O43292 621 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 ECM2O94769 699 aaPredicted RBP22.83■■□□□ 1.25
TRADD-203ENST00000563348 HOXD10P28358 340 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 SOX10P56693 466 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 ARMC5Q96C12 935 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 FSD1Q9BTV5 496 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 LNPKQ9C0E8 428 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 PTCH2Q9Y6C5 1203 aa22.83■■□□□ 1.25
TRADD-203ENST00000563348 NAV1Q8NEY1 1877 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 SMIM22K7EJ46 135 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 GNAT2P19087 354 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 GCLCP48506 637 aaPredicted RBP22.82■■□□□ 1.24
TRADD-203ENST00000563348 CDK8P49336 464 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 SEPT2Q15019 361 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 B4GALNT3Q6L9W6 998 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 ACER1Q8TDN7 264 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 KIAA1683Q9H0B3 1180 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 SRRDQ9UH36 339 aa22.82■■□□□ 1.24
TRADD-203ENST00000563348 HTTP42858 3142 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 M0R2C6 588 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 MPHOSPH10O00566 681 aaKnown RBP22.81■■□□□ 1.24
TRADD-203ENST00000563348 FCGRTP55899 365 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 SBK1Q52WX2 424 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 ZMYM1Q5SVZ6 1142 aa22.81■■□□□ 1.24
TRADD-203ENST00000563348 C16orf86Q6ZW13 317 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms