RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 Q6ZUG5 572 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 GBP3Q9H0R5 595 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 CCDC87Q9NVE4 849 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 PCDHA7Q9UN72 937 aa15.93■□□□□ 0.14
GTF3C1-203ENST00000562609 NUP98P52948 1817 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 RNF113AO15541 343 aaKnown RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 SLC3A2P08195 630 aaKnown RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 INPP5BP32019 993 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 HAND2P61296 217 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 MAP9Q49MG5 647 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 ZMYM1Q5SVZ6 1142 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 HMG20BQ9P0W2 317 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 PHLPP1O60346 1717 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 PLCH1Q4KWH8 1693 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 HSP90B1P14625 803 aaKnown RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 SMARCC1Q92922 1105 aaPredicted RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 ZNF396Q96N95 335 aaPredicted RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 CDC23Q9UJX2 597 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 JCADQ9P266 1359 aa15.92■□□□□ 0.14
GTF3C1-203ENST00000562609 LRP6O75581 1613 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 LTBP4Q8N2S1 1624 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 C21orf2O43822 256 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 SYF2O95926 243 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 MCAMP43121 646 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 ZNF34Q8IZ26 560 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 MIEF2Q96C03 454 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 TFRCP02786 760 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 IGSF22Q8N9C0 903 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 PUS7LQ9H0K6 701 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 RABEP2Q9H5N1 569 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 MRPL44Q9H9J2 332 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 LZTFL1Q9NQ48 299 aa15.91■□□□□ 0.14
GTF3C1-203ENST00000562609 IKBKBO14920 756 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 PDE8AO60658 829 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 PRPF6O94906 941 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 ELF1P32519 619 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 POTEDQ86YR6 584 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 ALDH8A1Q9H2A2 487 aaPredicted RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 RIC1Q4ADV7 1423 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 STX10O60499 249 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 ADKP55263 362 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 NEDD9Q14511 834 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 PRPF38AQ8NAV1 312 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 STAG1Q8WVM7 1258 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 CABS1Q96KC9 395 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 HELLSQ9NRZ9 838 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 CAPN7Q9Y6W3 813 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 GOLGB1Q14789 3259 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 SLIT2O94813 1529 aa15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 MYH14Q7Z406 1995 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 COL22A1Q8NFW1 1626 aaPredicted RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 RIN2Q8WYP3 895 aaPredicted RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 NIP7Q9Y221 180 aaKnown RBP eCLIP15.9■□□□□ 0.14
GTF3C1-203ENST00000562609 ERVV-1B6SEH8 477 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 PHKA1P46020 1223 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 GUCY1B3Q02153 619 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 MAP2K1Q02750 393 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 TACO1Q9BSH4 297 aaKnown RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 CDCA7Q9BWT1 371 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 FANCLQ9NW38 375 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 NEDD4P46934 1319 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 H0YHG0 523 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 ADALQ6DHV7 355 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 NAA16Q6N069 864 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 BICDL1Q6ZP65 573 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 N4BP2L2Q92802 583 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 KAT14Q9H8E8 782 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 CD248Q9HCU0 757 aa15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 THRAP3Q9Y2W1 955 aaKnown RBP15.89■□□□□ 0.13
GTF3C1-203ENST00000562609 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 MYO1FO00160 1098 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 NEBLO76041 1014 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 PDE8BO95263 885 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 MTF1Q14872 753 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 KIF4BQ2VIQ3 1234 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 FAXDC2Q96IV6 333 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 GPHNQ9NQX3 736 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 TOM1O60784 492 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 RDXP35241 583 aaKnown RBP15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 BIRC2Q13490 618 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 KRT32Q14532 448 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 SLC24A3Q9HC58 644 aa15.88■□□□□ 0.13
GTF3C1-203ENST00000562609 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 AARSP49588 968 aaKnown RBP eCLIP15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 IRAK1P51617 712 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 MYL5Q02045 173 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 GRIPAP1Q4V328 841 aa15.87■□□□□ 0.13
GTF3C1-203ENST00000562609 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms