RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ISCA1Q9BUE6 129 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 MAP10Q9P2G4 905 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 TSPYL4Q9UJ04 414 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 CACNA1AO00555 2505 aa6.91□□□□□ -1.3
HERC1-213ENST00000561359 BDP1A6H8Y1 2624 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 J3QL48 77 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 PDHXO00330 501 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 AXIN1O15169 862 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 FLT3LGP49771 235 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 CCT4P50991 539 aaKnown RBP6.9□□□□□ -1.3
HERC1-213ENST00000561359 SKIV2LQ15477 1246 aaKnown RBP6.9□□□□□ -1.3
HERC1-213ENST00000561359 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 TXNRD3Q86VQ6 643 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 ERO1BQ86YB8 467 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
HERC1-213ENST00000561359 PLBD2Q8NHP8 589 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERC1-213ENST00000561359 CDC5LQ99459 802 aaKnown RBP6.9□□□□□ -1.3
HERC1-213ENST00000561359 LBHD1Q9BQE6 289 aaPredicted RBP6.9□□□□□ -1.3
HERC1-213ENST00000561359 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.9□□□□□ -1.3
HERC1-213ENST00000561359 C11orf49Q9H6J7 331 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 AOX1Q06278 1338 aa6.9□□□□□ -1.3
HERC1-213ENST00000561359 CDH23Q9H251 3354 aa6.9□□□□□ -1.31
HERC1-213ENST00000561359 LAMB1P07942 1786 aa6.9□□□□□ -1.31
HERC1-213ENST00000561359 PSME4Q14997 1843 aa6.9□□□□□ -1.31
HERC1-213ENST00000561359 PER1O15534 1290 aaPredicted RBP6.89□□□□□ -1.31
HERC1-213ENST00000561359 PDE8AO60658 829 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 SMPD1P17405 629 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 PPIL2Q13356 520 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 AGERQ15109 404 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 TPRNQ4KMQ1 711 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 ANKRD23Q86SG2 305 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 CERS5Q8N5B7 392 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
HERC1-213ENST00000561359 ZNF511Q8NB15 262 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 WRNIP1Q96S55 665 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 PARK7Q99497 189 aaKnown RBP6.89□□□□□ -1.31
HERC1-213ENST00000561359 AAASQ9NRG9 546 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 MINPP1Q9UNW1 487 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 HCN4Q9Y3Q4 1203 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 SNCAIPQ9Y6H5 919 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
HERC1-213ENST00000561359 TCP10L2B9ZVM9 353 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 TNPO2O14787 897 aaKnown RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 KLRK1P26718 216 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 KCNJ4P48050 445 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 TRIM28Q13263 835 aaKnown RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 JARID2Q92833 1246 aaPredicted RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 ZKSCAN4Q969J2 545 aaPredicted RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 TEPSINQ96N21 525 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 TMEM39BQ9GZU3 492 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 ZNF70Q9UC06 446 aaPredicted RBP6.88□□□□□ -1.31
HERC1-213ENST00000561359 LEMD3Q9Y2U8 911 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 MUC6Q6W4X9 2439 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
HERC1-213ENST00000561359 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 AVPP01185 164 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 CYP2C8P10632 490 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 BCRP11274 1271 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 TNNI2P48788 182 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 IRF5Q13568 498 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 CTC1Q2NKJ3 1217 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 ALYREFQ86V81 257 aaKnown RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 USP38Q8NB14 1042 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 PROCA1Q8NCQ7 364 aaPredicted RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 ADAMTS19Q8TE59 1207 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 UHRF1Q96T88 793 aaPredicted RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 C1QTNF1Q9BXJ1 281 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 TTYH1Q9H313 450 aaPredicted RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 TDRD3Q9H7E2 651 aaKnown RBP6.87□□□□□ -1.31
HERC1-213ENST00000561359 CD209Q9NNX6 404 aa6.87□□□□□ -1.31
HERC1-213ENST00000561359 PFASO15067 1338 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 VARSP26640 1264 aaKnown RBP6.86□□□□□ -1.31
HERC1-213ENST00000561359 PPATQ06203 517 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 LRRC26Q2I0M4 334 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 ARMC2Q8NEN0 867 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 HPS1Q92902 700 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 COA7Q96BR5 231 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 HMX1Q9NP08 348 aaPredicted RBP6.86□□□□□ -1.31
HERC1-213ENST00000561359 JAG2Q9Y219 1238 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 OTOFQ9HC10 1997 aa6.86□□□□□ -1.31
HERC1-213ENST00000561359 COL2A1P02458 1487 aaPredicted RBP6.85□□□□□ -1.31
HERC1-213ENST00000561359 HMGCRP04035 888 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 PCCAP05165 728 aaPredicted RBP6.85□□□□□ -1.31
HERC1-213ENST00000561359 IGHMBP2P38935 993 aaKnown RBP6.85□□□□□ -1.31
HERC1-213ENST00000561359 CTSWP56202 376 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 CTDSPL2Q05D32 466 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 HDGFL1Q5TGJ6 251 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 CRIPAKQ8N1N5 446 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 ATXN2LQ8WWM7 1075 aaKnown RBP6.85□□□□□ -1.31
HERC1-213ENST00000561359 PPM1EQ8WY54 764 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 FOXJ1Q92949 421 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 ASB2Q96Q27 587 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms