RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 BAZ2AQ9UIF9 1905 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 PHIPQ8WWQ0 1821 aa18.6■□□□□ 0.57
RABGGTA-219ENST00000560871 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 CAP2P40123 477 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 TATDN1Q6P1N9 297 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 GIMAP6Q6P9H5 292 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 ZCCHC17Q9NP64 241 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 KCNH4Q9UQ05 1017 aa18.59■□□□□ 0.57
RABGGTA-219ENST00000560871 SMIM22K7EJ46 135 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 PTPRAP18433 802 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 SDSP20132 328 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 SHMT1P34896 483 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 JAG1P78504 1218 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 NMIQ13287 307 aaPredicted RBP18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 TAF1CQ15572 869 aaPredicted RBP18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 C12orf60Q5U649 245 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 CTR9Q6PD62 1173 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 FBXO46Q6PJ61 603 aaPredicted RBP18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 SKAP1Q86WV1 359 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 ZFYVE28Q9HCC9 887 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 ARPP21Q9UBL0 812 aaPredicted RBP18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 HPS5Q9UPZ3 1129 aa18.58■□□□□ 0.56
RABGGTA-219ENST00000560871 ROBO3Q96MS0 1386 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 BTBD19C9JJ37 291 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 USP17L21D6R901 530 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 SBK1Q52WX2 424 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 CCDC84Q86UT8 332 aaPredicted RBP18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 ERO1AQ96HE7 468 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 PTPRFP10586 1907 aa18.57■□□□□ 0.56
RABGGTA-219ENST00000560871 PATL2C9JE40 543 aaKnown RBP18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 GDF11O95390 407 aa18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 SP3Q02447 781 aa18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 DDRGK1Q96HY6 314 aa18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
RABGGTA-219ENST00000560871 MOGSQ13724 837 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 OTOP1Q7RTM1 612 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 IFNL3Q8IZI9 196 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 SLC44A5Q8NCS7 719 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 CD99L2Q8TCZ2 262 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 DYNLL2Q96FJ2 89 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 GINM1Q9NU53 330 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 AFG3L2Q9Y4W6 797 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
RABGGTA-219ENST00000560871 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 HIP1O00291 1037 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 CXCL11O14625 94 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 ASNSP08243 561 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 C16orf86Q6ZW13 317 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 ANKRD23Q86SG2 305 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 SWAP70Q9UH65 585 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 TRIM17Q9Y577 477 aa18.54■□□□□ 0.56
RABGGTA-219ENST00000560871 TLR2O60603 784 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 TDO2P48775 406 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 CAP1Q01518 475 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 IL25Q9H293 177 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 DIAPH3Q9NSV4 1193 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
RABGGTA-219ENST00000560871 A0A0G2JLL6 359 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 GH2P01242 217 aa18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 APPP05067 770 aa18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 CERKLQ49MI3 558 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 CWC27Q6UX04 472 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 PRRT2Q7Z6L0 340 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 NAPBQ9H115 298 aa18.52■□□□□ 0.56
RABGGTA-219ENST00000560871 ZMYM6O95789 1325 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 ZSWIM8A7E2V4 1837 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 USP17L5A8MUK1 530 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 PDHXO00330 501 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 GUCY1A2P33402 732 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 CDK8P49336 464 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 GPAT2Q6NUI2 795 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 WDR18Q9BV38 432 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 NACAP1Q9BZK3 213 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 EFCC1Q9HA90 598 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 PTPN22Q9Y2R2 807 aa18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 GREB1LQ9C091 1923 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-219ENST00000560871 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 HSPD1P10809 573 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 MLLT1Q03111 559 aaPredicted RBP18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 ALX1Q15699 326 aa18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 ABCB5Q2M3G0 1257 aa18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 C17orf99Q6UX52 265 aa18.5■□□□□ 0.55
RABGGTA-219ENST00000560871 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms