RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IL13P35225 146 aa9.88□□□□□ -0.83
SPG11-213ENST00000558988 GDF6Q6KF10 455 aaPredicted RBP9.88□□□□□ -0.83
SPG11-213ENST00000558988 MAP4K3Q8IVH8 894 aa9.88□□□□□ -0.83
SPG11-213ENST00000558988 NFATC2IPQ8NCF5 419 aa9.88□□□□□ -0.83
SPG11-213ENST00000558988 CEP41Q9BYV8 373 aa9.88□□□□□ -0.83
SPG11-213ENST00000558988 COL24A1Q17RW2 1714 aa9.87□□□□□ -0.83
SPG11-213ENST00000558988 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
SPG11-213ENST00000558988 SSFA2P28290 1259 aa9.87□□□□□ -0.83
SPG11-213ENST00000558988 UVSSAQ2YD98 709 aa9.87□□□□□ -0.83
SPG11-213ENST00000558988 FAM46AQ96IP4 442 aaKnown RBP9.87□□□□□ -0.83
SPG11-213ENST00000558988 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
SPG11-213ENST00000558988 DIAPH1O60610 1272 aaKnown RBP9.86□□□□□ -0.83
SPG11-213ENST00000558988 WISP1O95388 367 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 MMP10P09238 476 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 JUNBP17275 347 aaPredicted RBP9.86□□□□□ -0.83
SPG11-213ENST00000558988 SEMA3FQ13275 785 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 HIF1AQ16665 826 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 PLD4Q96BZ4 506 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 IFT43Q96FT9 208 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 KDRP35968 1356 aa9.86□□□□□ -0.83
SPG11-213ENST00000558988 RFC4P35249 363 aa9.85□□□□□ -0.83
SPG11-213ENST00000558988 LGR6Q9HBX8 967 aa9.85□□□□□ -0.83
SPG11-213ENST00000558988 CD2APQ9Y5K6 639 aa9.85□□□□□ -0.83
SPG11-213ENST00000558988 WDR64B1ANS9 1081 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 IER5Q5VY09 327 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 CLEC10AQ8IUN9 316 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 ZNF526Q8TF50 670 aaPredicted RBP9.84□□□□□ -0.83
SPG11-213ENST00000558988 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 FAM83CQ9BQN1 747 aa9.84□□□□□ -0.83
SPG11-213ENST00000558988 DMGDHQ9UI17 866 aaKnown RBP9.84□□□□□ -0.83
SPG11-213ENST00000558988 SCN11AQ9UI33 1791 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 GRIN3BO60391 1043 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 RARAP10276 462 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 SKIP12755 728 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
SPG11-213ENST00000558988 CRKLP46109 303 aaKnown RBP9.83□□□□□ -0.84
SPG11-213ENST00000558988 COL19A1Q14993 1142 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 MTHFSDQ2M296 383 aaKnown RBP9.83□□□□□ -0.84
SPG11-213ENST00000558988 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 DNAJC10Q8IXB1 793 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 GALNT11Q8NCW6 608 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 SRP68Q9UHB9 627 aaKnown RBP9.83□□□□□ -0.84
SPG11-213ENST00000558988 PLEKHG2Q9H7P9 1386 aa9.83□□□□□ -0.84
SPG11-213ENST00000558988 CNTNAP4Q9C0A0 1308 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 CICQ96RK0 1608 aaPredicted RBP9.82□□□□□ -0.84
SPG11-213ENST00000558988 COL5A3P25940 1745 aaPredicted RBP9.82□□□□□ -0.84
SPG11-213ENST00000558988 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
SPG11-213ENST00000558988 PPP1R12BO60237 982 aaPredicted RBP9.82□□□□□ -0.84
SPG11-213ENST00000558988 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 SASH3O75995 380 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 NCOA4Q13772 614 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 NFXL1Q6ZNB6 911 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 SLC52A2Q9HAB3 445 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 PIM2Q9P1W9 311 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 CCDC39Q9UFE4 941 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 BCS1LQ9Y276 419 aa9.82□□□□□ -0.84
SPG11-213ENST00000558988 MYH14Q7Z406 1995 aaKnown RBP9.81□□□□□ -0.84
SPG11-213ENST00000558988 J3QW42 95 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 NRLP54845 237 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 FAM20CQ8IXL6 584 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 NLGN1Q8N2Q7 840 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 TPCN2Q8NHX9 752 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 CFAP53Q96M91 514 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 VIRMAQ69YN4 1812 aaKnown RBP9.81□□□□□ -0.84
SPG11-213ENST00000558988 TJP1Q07157 1748 aa9.81□□□□□ -0.84
SPG11-213ENST00000558988 C4AP0C0L4 1744 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 A0A0G2JLW4 131 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 LZTS3O60299 673 aaPredicted RBP9.8□□□□□ -0.84
SPG11-213ENST00000558988 GYS1P13807 737 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 EPB42P16452 691 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 TP53INP2Q8IXH6 220 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 TTC5Q8N0Z6 440 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 CCDC87Q9NVE4 849 aa9.8□□□□□ -0.84
SPG11-213ENST00000558988 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
SPG11-213ENST00000558988 TGFBR3LH3BV60 316 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 C21orf2O43822 256 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 CANXP27824 592 aaKnown RBP9.79□□□□□ -0.84
SPG11-213ENST00000558988 PRKAR2BP31323 418 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 TEFQ10587 303 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 MSMPQ1L6U9 139 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 KCNF1Q9H3M0 494 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 KCNK4Q9NYG8 393 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 ATP10DQ9P241 1426 aa9.79□□□□□ -0.84
SPG11-213ENST00000558988 COL3A1P02461 1466 aaPredicted RBP9.79□□□□□ -0.84
SPG11-213ENST00000558988 ZNF831Q5JPB2 1677 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 ZBTB7BO15156 539 aaPredicted RBP9.78□□□□□ -0.84
SPG11-213ENST00000558988 U2AF1L5P0DN76 240 aaPredicted RBP9.78□□□□□ -0.84
SPG11-213ENST00000558988 DPEP1P16444 411 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 INPP5BP32019 993 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 C1QTNF8P60827 252 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 U2AF1Q01081 240 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPG11-213ENST00000558988 USPL1Q5W0Q7 1092 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 FBXL18Q96ME1 805 aa9.78□□□□□ -0.84
SPG11-213ENST00000558988 KIAA1024Q9UPX6 916 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms