RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 MAP4K4O95819 1239 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 GSTO1P78417 241 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 RAI14Q9P0K7 980 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 MORF4L1Q9UBU8 362 aa13.65□□□□□ -0.22
RABGGTA-204ENST00000558376 RPTORQ8N122 1335 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 BMP8BP34820 402 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 MTX1Q13505 466 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 TRIB2Q92519 343 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 P2RX7Q99572 595 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 HMX1Q9NP08 348 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 TSHZ2Q9NRE2 1034 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 CDK5RAP2Q96SN8 1893 aa13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 MYO5AQ9Y4I1 1855 aaKnown RBP13.64□□□□□ -0.23
RABGGTA-204ENST00000558376 GNAI2P04899 355 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 ARID4AP29374 1257 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 SHROOM1Q2M3G4 852 aaPredicted RBP13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 TBC1D2Q9BYX2 928 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 SYN1P17600 705 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 CYP2B6P20813 491 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 MCAMP43121 646 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
RABGGTA-204ENST00000558376 GNAI3P08754 354 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 MTMR2Q13614 643 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 MAP3K21Q5TCX8 1036 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 C11orf49Q9H6J7 331 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 PI4KBQ9UBF8 816 aa13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
RABGGTA-204ENST00000558376 PNMA6EA0A0J9YXQ4 647 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 APBB1O00213 710 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 HOXA7P31268 230 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 BACE1P56817 501 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 Q3C1V9 767 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 POTEEQ6S8J3 1075 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 RPAP2Q8IXW5 612 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 DNAJC18Q9H819 358 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 SNRKQ9NRH2 765 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 RBPJLQ9UBG7 517 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
RABGGTA-204ENST00000558376 PFASO15067 1338 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 HERVK_113P62684 666 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 Q7L0L9 218 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 GPRC5AQ8NFJ5 357 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 USP6NLQ92738 828 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 TMOD4Q9NZQ9 345 aa13.6□□□□□ -0.23
RABGGTA-204ENST00000558376 UQCRFS1P1P0C7P4 283 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 PDE4AP27815 886 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 PPP4CP60510 307 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 ADGRA1Q86SQ6 560 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 LNPKQ9C0E8 428 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 DHX36Q9H2U1 1008 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 GDF11O95390 407 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 ASNSP08243 561 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 XRCC5P13010 732 aaKnown RBP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 CCL14Q16627 93 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 DEFB123Q8N688 67 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 PORCNQ9H237 461 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
RABGGTA-204ENST00000558376 COL6A1P12109 1028 aa13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 CCND3P30281 292 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 NUCB1Q02818 461 aa13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 LRIT3Q3SXY7 679 aa13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 LHX8Q68G74 356 aa13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 FLT1P17948 1338 aa13.58□□□□□ -0.24
RABGGTA-204ENST00000558376 USP17L10C9JJH3 530 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 SMARCA5O60264 1052 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 BAG3O95817 575 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 ERVK-9P63128 1117 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 ERVK-24P63145 666 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 MORN1Q5T089 497 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms