RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CDC37L1Q7L3B6 337 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 KSR1Q8IVT5 923 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 STK11IPQ8N1F8 1099 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 MIR1-1HGQ9H1L0 117 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 PICK1Q9NRD5 415 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 SLC5A6Q9Y289 635 aa6.44□□□□□ -1.38
LEMD3-204ENST00000542032 RPL6Q02878 288 aaKnown RBP6.43□□□□□ -1.38
LEMD3-204ENST00000542032 LMNB2Q03252 620 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 PRKCQQ04759 706 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 KRTAP1-1Q07627 177 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 MRPL58Q14197 206 aaKnown RBP6.43□□□□□ -1.38
LEMD3-204ENST00000542032 IFI16Q16666 785 aaKnown RBP6.43□□□□□ -1.38
LEMD3-204ENST00000542032 SPRED2Q7Z698 418 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 HID1Q8IV36 788 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 MFSD2AQ8NA29 543 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 FOXQ1Q9C009 403 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 GTF2IRD1Q9UHL9 959 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 VAV3Q9UKW4 847 aa6.43□□□□□ -1.38
LEMD3-204ENST00000542032 FAM221AA4D161 298 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 CILPO75339 1184 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 CST3P01034 146 aaPredicted RBP6.42□□□□□ -1.38
LEMD3-204ENST00000542032 LMNB1P20700 586 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 GRK4P32298 578 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
LEMD3-204ENST00000542032 C22orf34Q6ZV56 151 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 AGBL5Q8NDL9 886 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 FLCNQ8NFG4 579 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 BCL2L13Q9BXK5 485 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 MRS2Q9HD23 443 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 VTI1BQ9UEU0 232 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 MAPK8IP1Q9UQF2 711 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 SNX11Q9Y5W9 270 aa6.42□□□□□ -1.38
LEMD3-204ENST00000542032 TMEM265A0A087WTH1 108 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 GARTP22102 1010 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 ITGAEP38570 1179 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 ETF1P62495 437 aaKnown RBP6.41□□□□□ -1.38
LEMD3-204ENST00000542032 BNIP3Q12983 259 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 CAMK2GQ13555 558 aaPredicted RBP6.41□□□□□ -1.38
LEMD3-204ENST00000542032 NKPD1Q17RQ9 610 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 BNC2Q6ZN30 1099 aaPredicted RBP6.41□□□□□ -1.38
LEMD3-204ENST00000542032 ERMP1Q7Z2K6 904 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 SPACA3Q8IXA5 215 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 MRPL41Q8IXM3 137 aaKnown RBP6.41□□□□□ -1.38
LEMD3-204ENST00000542032 GIPC2Q8TF65 315 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 TJP2Q9UDY2 1190 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 CNTNAP4Q9C0A0 1308 aa6.41□□□□□ -1.38
LEMD3-204ENST00000542032 PF4P02776 101 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 CD8BP10966 210 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 PRAMEF13Q5VWM6 474 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 GATAD2BQ8WXI9 593 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 KCNQ5Q9NR82 932 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 ADAM30Q9UKF2 790 aa6.4□□□□□ -1.38
LEMD3-204ENST00000542032 PRR36Q9H6K5 1346 aa6.4□□□□□ -1.39
LEMD3-204ENST00000542032 FUT4P22083 530 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 PWP1Q13610 501 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 ZNF326Q5BKZ1 582 aaKnown RBP6.39□□□□□ -1.39
LEMD3-204ENST00000542032 LDLRAD1Q5T700 205 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 SLC6A19Q695T7 634 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 RELL1Q8IUW5 271 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 MCATQ8IVS2 390 aaKnown RBP6.39□□□□□ -1.39
LEMD3-204ENST00000542032 HRASLS5Q96KN8 279 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 PRDM5Q9NQX1 630 aaPredicted RBP6.39□□□□□ -1.39
LEMD3-204ENST00000542032 CARMIL2Q6F5E8 1435 aa6.39□□□□□ -1.39
LEMD3-204ENST00000542032 F6X3S4 739 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 F13A1P00488 732 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 PGRP06401 933 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 ITIH2P19823 946 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 PDE4BQ07343 736 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 AOC3Q16853 763 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 TMEM201Q5SNT2 666 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 TMCO4Q5TGY1 634 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 LETMD1Q6P1Q0 360 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 JARID2Q92833 1246 aaPredicted RBP6.38□□□□□ -1.39
LEMD3-204ENST00000542032 ACSF2Q96CM8 615 aaPredicted RBP6.38□□□□□ -1.39
LEMD3-204ENST00000542032 TMEM87BQ96K49 555 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 SLC38A3Q99624 504 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 MIPEPQ99797 713 aa6.38□□□□□ -1.39
LEMD3-204ENST00000542032 PITPNM2Q9BZ72 1349 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 ZBTB7CA1YPR0 619 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 GBP2P32456 591 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-204ENST00000542032 CD96P40200 585 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 CLCN7P51798 805 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 LCNL1Q6ZST4 164 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 CORINQ9Y5Q5 1042 aa6.37□□□□□ -1.39
LEMD3-204ENST00000542032 ZNF16P17020 682 aaPredicted RBP6.36□□□□□ -1.39
LEMD3-204ENST00000542032 ZNF792Q3KQV3 632 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 ZNF746Q6NUN9 644 aaPredicted RBP6.36□□□□□ -1.39
LEMD3-204ENST00000542032 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 CILP2Q8IUL8 1156 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 COX4I2Q96KJ9 171 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 SEMA3GQ9NS98 782 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 KBTBD4Q9NVX7 518 aa6.36□□□□□ -1.39
LEMD3-204ENST00000542032 POLR3KQ9Y2Y1 108 aaPredicted RBP6.36□□□□□ -1.39
LEMD3-204ENST00000542032 GNAT3A8MTJ3 354 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 GREM1O60565 184 aa6.35□□□□□ -1.39
LEMD3-204ENST00000542032 CFPP27918 469 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms