RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
USB1-203ENST00000539737 RLBP1P12271 317 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.52
USB1-203ENST00000539737 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
USB1-203ENST00000539737 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
USB1-203ENST00000539737 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
USB1-203ENST00000539737 TGFBRAP1Q8WUH2 860 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 NBPF3Q9H094 633 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 LRP2BPQ9P2M1 347 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 PALD1Q9ULE6 856 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
USB1-203ENST00000539737 A0A1W2PPC1 479 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 GNAI2P04899 355 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 ARID4AP29374 1257 aaPredicted RBP18.32■□□□□ 0.52
USB1-203ENST00000539737 HERVK_113P62684 666 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 MDM2Q00987 491 aaPredicted RBP18.32■□□□□ 0.52
USB1-203ENST00000539737 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
USB1-203ENST00000539737 SH3D19Q5HYK7 790 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 RBPJLQ9UBG7 517 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 MORF4L1Q9UBU8 362 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
USB1-203ENST00000539737 FLT1P17948 1338 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 BACE1P56817 501 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
USB1-203ENST00000539737 COL2A1P02458 1487 aaPredicted RBP18.31■□□□□ 0.52
USB1-203ENST00000539737 ZBTB22O15209 634 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
USB1-203ENST00000539737 GSTO1P78417 241 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
USB1-203ENST00000539737 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 PIH1D3Q9NQM4 214 aaKnown RBP18.3■□□□□ 0.52
USB1-203ENST00000539737 TMOD4Q9NZQ9 345 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 FLRT1Q9NZU1 646 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 EYSQ5T1H1 3165 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 FRMPD3Q5JV73 1810 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 FOCADQ5VW36 1801 aa18.3■□□□□ 0.52
USB1-203ENST00000539737 LDHCP07864 332 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 BMP8BP34820 402 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 EVX2Q03828 476 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 PABPC4Q13310 644 aaKnown RBP eCLIP18.29■□□□□ 0.52
USB1-203ENST00000539737 MTX1Q13505 466 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 NAA16Q6N069 864 aaPredicted RBP18.29■□□□□ 0.52
USB1-203ENST00000539737 ANKLE1Q8NAG6 615 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 AS3MTQ9HBK9 375 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 EMILIN3Q9NT22 766 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 TLR7Q9NYK1 1049 aaKnown RBP18.29■□□□□ 0.52
USB1-203ENST00000539737 ZBTB21Q9ULJ3 1066 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 VCANP13611 3396 aa18.29■□□□□ 0.52
USB1-203ENST00000539737 CNMDO75829 334 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
USB1-203ENST00000539737 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
USB1-203ENST00000539737 PDE3AQ14432 1141 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 LHX8Q68G74 356 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 GPRC5AQ8NFJ5 357 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 WDR18Q9BV38 432 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
USB1-203ENST00000539737 PI4KBQ9UBF8 816 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
USB1-203ENST00000539737 DDX19BQ9UMR2 479 aa18.28■□□□□ 0.52
USB1-203ENST00000539737 COL6A1P12109 1028 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 ZAP70P43403 619 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 ERVK-9P63128 1117 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 ERVK-24P63145 666 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 TTC39AQ5SRH9 613 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 CRACR2BQ8N4Y2 399 aaPredicted RBP18.27■□□□□ 0.52
USB1-203ENST00000539737 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 USP6NLQ92738 828 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 MTMR10Q9NXD2 777 aa18.27■□□□□ 0.52
USB1-203ENST00000539737 GH2P01242 217 aa18.26■□□□□ 0.51
USB1-203ENST00000539737 G3BP1Q13283 466 aaKnown RBP eCLIP18.26■□□□□ 0.51
USB1-203ENST00000539737 MORN1Q5T089 497 aa18.26■□□□□ 0.51
USB1-203ENST00000539737 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
USB1-203ENST00000539737 USP17L10C9JJH3 530 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 ASNSP08243 561 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 HOXA7P31268 230 aaPredicted RBP18.25■□□□□ 0.51
USB1-203ENST00000539737 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
USB1-203ENST00000539737 TNNI3KQ59H18 835 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 NOL10Q9BSC4 688 aaKnown RBP18.25■□□□□ 0.51
USB1-203ENST00000539737 FPGT-TNNI3KV9GXZ4 949 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 MYH1P12882 1939 aa18.25■□□□□ 0.51
USB1-203ENST00000539737 CDH23Q9H251 3354 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 SOCS4Q8WXH5 440 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
USB1-203ENST00000539737 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
USB1-203ENST00000539737 CYP7A1P22680 504 aa18.23■□□□□ 0.51
USB1-203ENST00000539737 RRP1P56182 461 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms