RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 MYH7P12883 1935 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 MAGEB6P1A0A0J9YX57 407 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 CYP2D6P10635 497 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 EIF5P55010 431 aaKnown RBP8.54□□□□□ -1.04
C11orf54-207ENST00000528288 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
C11orf54-207ENST00000528288 ERFEQ4G0M1 354 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 BLZF1Q9H2G9 400 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 IKBKBO14920 756 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 TEX33O43247 280 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 AKAP17AQ02040 695 aaKnown RBP8.54□□□□□ -1.04
C11orf54-207ENST00000528288 DMTNQ08495 405 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 CCDC152Q4G0S7 254 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 VSTM4Q8IW00 320 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 TIGD1Q96MW7 591 aa8.54□□□□□ -1.04
C11orf54-207ENST00000528288 SPEF2Q9C093 1822 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 COL4A1P02462 1669 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 TICAM2Q86XR7 235 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 CNNM2Q9H8M5 875 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ZNF446Q9NWS9 450 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 MAPK8IP1Q9UQF2 711 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 LOC102724428A0A0B4J2F2 783 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 CAMTA2O94983 1202 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 PTPREP23469 700 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 GTF2E1P29083 439 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 SIK1P57059 783 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ALX1Q15699 326 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ARHGAP29Q52LW3 1261 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 STAG1Q8WVM7 1258 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 CARD6Q9BX69 1037 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 VWA3AA6NCI4 1184 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ERVV-1B6SEH8 477 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 ZNF771Q7L3S4 317 aaPredicted RBP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 PTF1AQ7RTS3 328 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 WDR24Q96S15 920 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 AATFQ9NY61 560 aaKnown RBP eCLIP8.53□□□□□ -1.04
C11orf54-207ENST00000528288 OGFRQ9NZT2 677 aa8.53□□□□□ -1.04
C11orf54-207ENST00000528288 PAPPAQ13219 1627 aa8.52□□□□□ -1.04
C11orf54-207ENST00000528288 USP17L12C9JPN9 530 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 USP17L21D6R901 530 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 SEC31AO94979 1220 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 DEXIO95424 95 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 IFIT1BQ5T764 474 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 ZNF397Q8NF99 534 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 ZNF384Q8TF68 577 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 CELF1Q92879 486 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 NRDCO43847 1150 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 NTSR2O95665 410 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 TFRCP02786 760 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 GNG11P61952 73 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 PKN1Q16512 942 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 TRIM65Q6PJ69 517 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 REXO1L1PQ8IX06 675 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 PLIN2Q99541 437 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 ATRNO75882 1429 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 TAF1P21675 1872 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 ETF1P62495 437 aaKnown RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 WASF1Q92558 559 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 EEF2KMTQ96G04 330 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 BAG1Q99933 345 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-207ENST00000528288 LZTFL1Q9NQ48 299 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 PPP2R2CQ9Y2T4 447 aa8.52□□□□□ -1.05
C11orf54-207ENST00000528288 NUP98P52948 1817 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 SOWAHDA6NJG2 315 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 CBFA2T2O43439 604 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
C11orf54-207ENST00000528288 DDB1Q16531 1140 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 FAM182BQ5T319 152 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 MARCH10Q8NA82 808 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-207ENST00000528288 ITGB4P16144 1822 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 MCM7P33993 719 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 ESR2Q92731 530 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 ZSCAN10Q96SZ4 725 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-207ENST00000528288 PSDA5PKW4 1024 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-207ENST00000528288 TRIM75PA6NK02 468 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 SEC23AQ15436 765 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 TMEM139Q8IV31 216 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 TC2NQ8N9U0 490 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 MNS1Q8NEH6 495 aa8.51□□□□□ -1.05
C11orf54-207ENST00000528288 FOXP1Q9H334 677 aaPredicted RBP8.51□□□□□ -1.05
C11orf54-207ENST00000528288 CLCN6P51797 869 aa8.5□□□□□ -1.05
C11orf54-207ENST00000528288 DPYDQ12882 1025 aa8.5□□□□□ -1.05
C11orf54-207ENST00000528288 MORC3Q14149 939 aa8.5□□□□□ -1.05
C11orf54-207ENST00000528288 GPKOWQ92917 476 aaPredicted RBP eCLIP8.5□□□□□ -1.05
C11orf54-207ENST00000528288 GPR101Q96P66 508 aaPredicted RBP8.5□□□□□ -1.05
C11orf54-207ENST00000528288 SRPRBQ9Y5M8 271 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms