RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 CNTNAP3Q9BZ76 1288 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 HMX1Q9NP08 348 aaPredicted RBP7.08□□□□□ -1.28
CHKA-204ENST00000528235 NR2E3Q9Y5X4 410 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 PTCH2Q9Y6C5 1203 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 COL4A1P02462 1669 aa7.08□□□□□ -1.28
CHKA-204ENST00000528235 MYO3BQ8WXR4 1341 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 ERVH48-1M5A8F1 160 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 WDHD1O75717 1129 aaPredicted RBP7.07□□□□□ -1.28
CHKA-204ENST00000528235 SASH1O94885 1247 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 ADH1AP07327 375 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 ITGA6P23229 1130 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 MMP14P50281 582 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 KIF22Q14807 665 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 TMEM132AQ24JP5 1023 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 SV2AQ7L0J3 742 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 GPR161Q8N6U8 529 aaKnown RBP7.07□□□□□ -1.28
CHKA-204ENST00000528235 XAGE3Q8WTP9 111 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 GMLQ99445 158 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 COL25A1Q9BXS0 654 aaPredicted RBP7.07□□□□□ -1.28
CHKA-204ENST00000528235 ZNF395Q9H8N7 513 aaPredicted RBP7.07□□□□□ -1.28
CHKA-204ENST00000528235 TMPRSS4Q9NRS4 437 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 FZD1Q9UP38 647 aa7.07□□□□□ -1.28
CHKA-204ENST00000528235 CLSPNQ9HAW4 1339 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 COL1A1P02452 1464 aaPredicted RBP7.06□□□□□ -1.28
CHKA-204ENST00000528235 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 UNCXA6NJT0 531 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 ATP2B4P23634 1241 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 IREB2P48200 963 aaKnown RBP7.06□□□□□ -1.28
CHKA-204ENST00000528235 TAF1CQ15572 869 aaPredicted RBP7.06□□□□□ -1.28
CHKA-204ENST00000528235 PROSER3Q2NL68 480 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 SH3TC2Q8TF17 1288 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 ZFYVE28Q9HCC9 887 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 BCCIPQ9P287 314 aaKnown RBP eCLIP7.06□□□□□ -1.28
CHKA-204ENST00000528235 TSPYL4Q9UJ04 414 aa7.06□□□□□ -1.28
CHKA-204ENST00000528235 XDHP47989 1333 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 CDC14CA4D256 554 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 ESPNB1AK53 854 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 ATP5J2-PTCD1G3V325 749 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 RNF225M0QZC1 329 aaPredicted RBP7.05□□□□□ -1.28
CHKA-204ENST00000528235 IRS4O14654 1257 aaPredicted RBP7.05□□□□□ -1.28
CHKA-204ENST00000528235 PTGIRP43119 386 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 KRT76Q01546 638 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 MAP3K11Q16584 847 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 SUPT20HL1Q3ZLR7 823 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 CLMNQ96JQ2 1002 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 MXD3Q9BW11 206 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 DEFB129Q9H1M3 183 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 SEC31BQ9NQW1 1179 aa7.05□□□□□ -1.28
CHKA-204ENST00000528235 MYO1BO43795 1136 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 LILRA1O75019 489 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 PRMT2P55345 433 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 CCDC152Q4G0S7 254 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 DACT2Q5SW24 774 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 STRIP1Q5VSL9 837 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 KIAA0825Q8IV33 1275 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 ANKRD18AQ8IVF6 992 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 ANKRD13AQ8IZ07 590 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 PLBD2Q8NHP8 589 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 PTPN18Q99952 460 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 CHMP4AQ9BY43 222 aa7.04□□□□□ -1.28
CHKA-204ENST00000528235 MAPK8IP3Q9UPT6 1336 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 DOCK3Q8IZD9 2030 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 ZBBXA8MT70 800 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 GNRH1P01148 92 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 ADD1P35611 737 aaKnown RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 CAP1Q01518 475 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 DLGAP5Q15398 846 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 TTLL5Q6EMB2 1281 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 LYSMD3Q7Z3D4 306 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 SVOPQ8N4V2 548 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 DEFB123Q8N688 67 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 CCDC85AQ96PX6 553 aaPredicted RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 ISCA1Q9BUE6 129 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 PNNQ9H307 717 aaKnown RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 PRO3102Q9H379 93 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 ELP3Q9H9T3 547 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 BIN2Q9UBW5 565 aaPredicted RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 PPP2R3BQ9Y5P8 575 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 RANBP2P49792 3224 aaKnown RBP7.03□□□□□ -1.28
CHKA-204ENST00000528235 MED23Q9ULK4 1368 aa7.03□□□□□ -1.28
CHKA-204ENST00000528235 ARAP2Q8WZ64 1704 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 CCL15-CCL14A0A0B4J2E2 113 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 USP2O75604 605 aaPredicted RBP7.02□□□□□ -1.29
CHKA-204ENST00000528235 HOXD10P28358 340 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 GTF2A2P52657 109 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
CHKA-204ENST00000528235 UBXN2AP68543 259 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 MTFR1Q15390 333 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 NFE2L2Q16236 605 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 CCL15Q16663 113 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 RAET1EQ8TD07 263 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 OPTNQ96CV9 577 aa7.02□□□□□ -1.29
CHKA-204ENST00000528235 TRIM34Q9BYJ4 488 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms