RNA–Protein interactions for RNA: ENST00000527203.5

FGFR1-231, Transcript of fibroblast growth factor receptor 1, human

TSL 3

Gene FGFR1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-231	ENST00000527203	EVX2	Q03828	476 aa		13.97	□□□□□ -0.17
FGFR1-231	ENST00000527203	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.97	□□□□□ -0.17
FGFR1-231	ENST00000527203	DHX36	Q9H2U1	1008 aa	Known RBP	13.97	□□□□□ -0.17
FGFR1-231	ENST00000527203	PNMA3	Q9UL41	463 aa		13.97	□□□□□ -0.17
FGFR1-231	ENST00000527203	ZBTB21	Q9ULJ3	1066 aa		13.97	□□□□□ -0.17
FGFR1-231	ENST00000527203	USP5	P45974	858 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	UBXN2A	P68543	259 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	ZYX	Q15942	572 aa	Known RBP	13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	FAM110C	Q1W6H9	321 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	HABP4	Q5JVS0	413 aa	Known RBP	13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	SLAIN1	Q8ND83	568 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	RHPN1	Q8TCX5	695 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	DNAJC2	Q99543	621 aa	Known RBP	13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	AS3MT	Q9HBK9	375 aa		13.96	□□□□□ -0.17
FGFR1-231	ENST00000527203	HLA-DOA	P06340	250 aa		13.95	□□□□□ -0.18
FGFR1-231	ENST00000527203	SH3D19	Q5HYK7	790 aa		13.95	□□□□□ -0.18
FGFR1-231	ENST00000527203	U2AF1L4	Q8WU68	220 aa	Known RBP	13.95	□□□□□ -0.18
FGFR1-231	ENST00000527203	EDC3	Q96F86	508 aa	Known RBP	13.95	□□□□□ -0.18
FGFR1-231	ENST00000527203	MYH8	P13535	1937 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	ALPK3	Q96L96	1907 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203		H0YGN5	161 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	GH2	P01242	217 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	ASNS	P08243	561 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	GJA8	P48165	433 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	BACE1	P56817	501 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	IRX3	P78415	501 aa	Predicted RBP	13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	TRIM32	Q13049	653 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	SLFNL1	Q499Z3	407 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	ERC1	Q8IUD2	1116 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	SIRT2	Q8IXJ6	389 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	COA7	Q96BR5	231 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	TMOD4	Q9NZQ9	345 aa		13.94	□□□□□ -0.18
FGFR1-231	ENST00000527203	GOLIM4	O00461	696 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	GJB1	P08034	283 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	MAP3K12	Q12852	859 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	C20orf194	Q5TEA3	1177 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	METTL16	Q86W50	562 aa	Known RBP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	DPF3	Q92784	378 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	GCC1	Q96CN9	775 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	DEFB118	Q96PH6	123 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	P2RX7	Q99572	595 aa	Known RBP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	RIOK1	Q9BRS2	568 aa	Known RBP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	WDR18	Q9BV38	432 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	TBC1D2	Q9BYX2	928 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	TXNRD2	Q9NNW7	524 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	COLQ	Q9Y215	455 aa	Predicted RBP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	MYH7	P12883	1935 aa		13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.93	□□□□□ -0.18
FGFR1-231	ENST00000527203	USP17L10	C9JJH3	530 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	FARP2	O94887	1054 aa	Predicted RBP	13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	CHGB	P05060	677 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	PDE6A	P16499	860 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	GCLC	P48506	637 aa	Predicted RBP	13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	PLCD1	P51178	756 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	RAB3GAP1	Q15042	981 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	PAGR1	Q9BTK6	254 aa		13.92	□□□□□ -0.18
FGFR1-231	ENST00000527203	ZNF532	Q9HCE3	1301 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	MAGEB6P1	A0A0J9YX57	407 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	IFIT2	P09913	472 aa	Known RBP	13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	HERVK_113	P62684	666 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	IRF5	Q13568	498 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	SLC9C2	Q5TAH2	1124 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	POTEE	Q6S8J3	1075 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	UBE2Q1	Q7Z7E8	422 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	CLASRP	Q8N2M8	674 aa	Known RBP	13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	LCORL	Q8N3X6	602 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	NKX2-3	Q8TAU0	364 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	PXYLP1	Q8TE99	480 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	DIS3L	Q8TF46	1054 aa	Known RBP	13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	SDR42E1	Q8WUS8	393 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	FEZ1	Q99689	392 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	EMILIN3	Q9NT22	766 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	ZBTB40	Q9NUA8	1239 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	SERPINB13	Q9UIV8	391 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	DDX19B	Q9UMR2	479 aa		13.91	□□□□□ -0.18
FGFR1-231	ENST00000527203	SGPL1	O95470	568 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	CYP2D6	P10635	497 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	CYP2B6	P20813	491 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	SHMT1	P34896	483 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	HSP90AB4P	Q58FF6	505 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	CHRDL2	Q6WN34	429 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	ACER1	Q8TDN7	264 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	TRIB2	Q92519	343 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	KIF1BP	Q96EK5	621 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	PORCN	Q9H237	461 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	ARMT1	Q9H993	441 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	PCDH10	Q9P2E7	1040 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	MORF4L1	Q9UBU8	362 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	RCAN3	Q9UKA8	241 aa		13.9	□□□□□ -0.18
FGFR1-231	ENST00000527203	SMIM22	K7EJ46	135 aa		13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	SMARCA5	O60264	1052 aa	Predicted RBP	13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	TFRC	P02786	760 aa	Known RBP	13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	POLR3D	P05423	398 aa	Predicted RBP	13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	ABCB5	Q2M3G0	1257 aa		13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203		Q3C1V9	767 aa		13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	CERKL	Q49MI3	558 aa	Predicted RBP	13.89	□□□□□ -0.19
FGFR1-231	ENST00000527203	TATDN1	Q6P1N9	297 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 273.7 ms