RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 SHROOM1Q2M3G4 852 aaPredicted RBP17.02■□□□□ 0.32
CSTF3-206ENST00000524827 NAA16Q6N069 864 aaPredicted RBP17.02■□□□□ 0.32
CSTF3-206ENST00000524827 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
CSTF3-206ENST00000524827 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
CSTF3-206ENST00000524827 AATFQ9NY61 560 aaKnown RBP eCLIP17.02■□□□□ 0.32
CSTF3-206ENST00000524827 FLT1P17948 1338 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 FOCADQ5VW36 1801 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 GDF11O95390 407 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 XRCC5P13010 732 aaKnown RBP17.01■□□□□ 0.31
CSTF3-206ENST00000524827 PLCG2P16885 1265 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 LRIT3Q3SXY7 679 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 Q7L0L9 218 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 MAPKAPK5Q8IW41 473 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 DEFB123Q8N688 67 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 SNRKQ9NRH2 765 aa17.01■□□□□ 0.31
CSTF3-206ENST00000524827 C19orf81C9J6K1 198 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 USP17L10C9JJH3 530 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 BAG3O95817 575 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 ZKSCAN1P17029 563 aaPredicted RBP17■□□□□ 0.31
CSTF3-206ENST00000524827 MAPK4P31152 587 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 G3BP1Q13283 466 aaKnown RBP eCLIP17■□□□□ 0.31
CSTF3-206ENST00000524827 PDE3AQ14432 1141 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 ADGRA1Q86SQ6 560 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 METTL16Q86W50 562 aaKnown RBP17■□□□□ 0.31
CSTF3-206ENST00000524827 TDHQ8IZJ6 230 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 CRACR2BQ8N4Y2 399 aaPredicted RBP17■□□□□ 0.31
CSTF3-206ENST00000524827 TGFBRAP1Q8WUH2 860 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 USP6NLQ92738 828 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 TRIM34Q9BYJ4 488 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
CSTF3-206ENST00000524827 GNAI2P04899 355 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 COL6A1P12109 1028 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 PPP4CP60510 307 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 ERVK-9P63128 1117 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 ERVK-24P63145 666 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 CACNB2Q08289 660 aaPredicted RBP16.99■□□□□ 0.31
CSTF3-206ENST00000524827 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
CSTF3-206ENST00000524827 TRMT44Q8IYL2 757 aaKnown RBP16.99■□□□□ 0.31
CSTF3-206ENST00000524827 UBE2OQ9C0C9 1292 aaKnown RBP16.99■□□□□ 0.31
CSTF3-206ENST00000524827 PORCNQ9H237 461 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 GINM1Q9NU53 330 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
CSTF3-206ENST00000524827 CCND3P30281 292 aaPredicted RBP16.98■□□□□ 0.31
CSTF3-206ENST00000524827 RGS2P41220 211 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 CCL14Q16627 93 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 Q3C1V9 767 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 MORN1Q5T089 497 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 GPR142Q7Z601 462 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 GTF3C2Q8WUA4 911 aaPredicted RBP16.98■□□□□ 0.31
CSTF3-206ENST00000524827 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 TNNQ9UQP3 1299 aa16.98■□□□□ 0.31
CSTF3-206ENST00000524827 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
CSTF3-206ENST00000524827 CYP2E1P05181 493 aaPredicted RBP16.97■□□□□ 0.31
CSTF3-206ENST00000524827 TRIM27P14373 513 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 LHX8Q68G74 356 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 PLEKHH3Q7Z736 793 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
CSTF3-206ENST00000524827 APBA2Q99767 749 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
CSTF3-206ENST00000524827 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
CSTF3-206ENST00000524827 HLA-DOAP06340 250 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 LRRC26Q2I0M4 334 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 TNNI3KQ59H18 835 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 GPR108Q9NPR9 543 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 MTMR10Q9NXD2 777 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 STXBP5LQ9Y2K9 1186 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 FPGT-TNNI3KV9GXZ4 949 aa16.96■□□□□ 0.31
CSTF3-206ENST00000524827 FRMPD3Q5JV73 1810 aa16.96■□□□□ 0.3
CSTF3-206ENST00000524827 GH2P01242 217 aa16.95■□□□□ 0.3
CSTF3-206ENST00000524827 CCDC158Q5M9N0 1113 aa16.95■□□□□ 0.3
CSTF3-206ENST00000524827 USP17L2Q6R6M4 530 aa16.95■□□□□ 0.3
CSTF3-206ENST00000524827 PIH1D3Q9NQM4 214 aaKnown RBP16.95■□□□□ 0.3
CSTF3-206ENST00000524827 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
CSTF3-206ENST00000524827 ZAP70P43403 619 aa16.94■□□□□ 0.3
CSTF3-206ENST00000524827 DYNLL1P63167 89 aaKnown RBP16.94■□□□□ 0.3
CSTF3-206ENST00000524827 MAP2K5Q13163 448 aa16.94■□□□□ 0.3
CSTF3-206ENST00000524827 ZYXQ15942 572 aaKnown RBP16.94■□□□□ 0.3
CSTF3-206ENST00000524827 ATF7IPQ6VMQ6 1270 aa16.94■□□□□ 0.3
CSTF3-206ENST00000524827 C12orf42Q96LP6 360 aa16.94■□□□□ 0.3
CSTF3-206ENST00000524827 CWC22Q9HCG8 908 aaKnown RBP16.94■□□□□ 0.3
CSTF3-206ENST00000524827 MYH1P12882 1939 aa16.94■□□□□ 0.3
CSTF3-206ENST00000524827 CNMDO75829 334 aa16.93■□□□□ 0.3
CSTF3-206ENST00000524827 MDM2Q00987 491 aaPredicted RBP16.93■□□□□ 0.3
CSTF3-206ENST00000524827 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
CSTF3-206ENST00000524827 POLA2Q14181 598 aa16.93■□□□□ 0.3
CSTF3-206ENST00000524827 FRAT1Q92837 279 aaPredicted RBP16.93■□□□□ 0.3
CSTF3-206ENST00000524827 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
CSTF3-206ENST00000524827 ZNF512BQ96KM6 892 aaPredicted RBP16.93■□□□□ 0.3
CSTF3-206ENST00000524827 FEZ1Q99689 392 aa16.93■□□□□ 0.3
CSTF3-206ENST00000524827 RABGAP1Q9Y3P9 1069 aa16.93■□□□□ 0.3
CSTF3-206ENST00000524827 IGSF3O75054 1194 aa16.92■□□□□ 0.3
CSTF3-206ENST00000524827 CYP7A1P22680 504 aa16.92■□□□□ 0.3
CSTF3-206ENST00000524827 CCNA1P78396 465 aa16.92■□□□□ 0.3
CSTF3-206ENST00000524827 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
CSTF3-206ENST00000524827 NDUFB9Q9Y6M9 179 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms