RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 OTOP1Q7RTM1 612 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 FAM151AQ8WW52 585 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 HOOK2Q96ED9 719 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 GDPD2Q9HCC8 539 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
CTNNA1-221ENST00000520339 CCL15-CCL14A0A0B4J2E2 113 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 BCAR3O75815 825 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 TRIM27P14373 513 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 CAP1Q01518 475 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 NFIAQ12857 509 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 MTMR2Q13614 643 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 CCL15Q16663 113 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 DCAF15Q66K64 600 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 ERO1BQ86YB8 467 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 ZKSCAN4Q969J2 545 aaPredicted RBP11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 ERO1AQ96HE7 468 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 WRNIP1Q96S55 665 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 ZNF112Q9UJU3 913 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 TNNQ9UQP3 1299 aa11.49□□□□□ -0.57
CTNNA1-221ENST00000520339 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 SP3Q02447 781 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 TCP10Q12799 353 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 TFCP2Q12800 502 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 ZFPM1Q8IX07 1006 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 FAM43AQ8N2R8 423 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 CD99L2Q8TCZ2 262 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 ZFYVE28Q9HCC9 887 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 PRM3Q9NNZ6 103 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 USP40Q9NVE5 1235 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 A0A1B0GUL6 1792 aa11.48□□□□□ -0.57
CTNNA1-221ENST00000520339 GAKO14976 1311 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 A0A1B0GUL7 405 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 GNAI2P04899 355 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 CETPP11597 493 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 INPP5BP32019 993 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 PPIL2Q13356 520 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 CCDC82Q8N4S0 544 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 TSC1Q92574 1164 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 LRCH3Q96II8 777 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 EFCC1Q9HA90 598 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 PTPN22Q9Y2R2 807 aa11.47□□□□□ -0.57
CTNNA1-221ENST00000520339 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 PPATQ06203 517 aa11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 SNAPC2Q13487 334 aa11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 ZGPATQ8N5A5 531 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 IDI2Q9BXS1 227 aa11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 ZCCHC17Q9NP64 241 aaKnown RBP11.46□□□□□ -0.57
CTNNA1-221ENST00000520339 AKAP11Q9UKA4 1901 aa11.46□□□□□ -0.58
CTNNA1-221ENST00000520339 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 ABL2P42684 1182 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 MVPQ14764 893 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 SH3BP5LQ7L8J4 393 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 FRAT1Q92837 279 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 ABCF2Q9UG63 623 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 KCNH4Q9UQ05 1017 aa11.45□□□□□ -0.58
CTNNA1-221ENST00000520339 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 TLR2O60603 784 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 ENTPD3O75355 529 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 WDHD1O75717 1129 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 RGS3P49796 1198 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 MAP3K10Q02779 954 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 SPTY2D1Q68D10 685 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 TMEM57Q8N5G2 664 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 ZNF384Q8TF68 577 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 NEUROD6Q96NK8 337 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 HMG20BQ9P0W2 317 aa11.44□□□□□ -0.58
CTNNA1-221ENST00000520339 ATRNL1Q5VV63 1379 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 GPR75-ASB3A0A0A6YYF3 556 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 CXCL11O14625 94 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 RHBDL3P58872 404 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 G3BP1Q13283 466 aaKnown RBP eCLIP11.43□□□□□ -0.582e-10■□□□□ 9.5
CTNNA1-221ENST00000520339 MOGSQ13724 837 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 ZKSCAN2Q63HK3 967 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 C17orf99Q6UX52 265 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 ANKRD23Q86SG2 305 aa11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-221ENST00000520339 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms