RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 ZBTB21Q9ULJ3 1066 aa30.65■■■□□ 2.5
PVT1-201ENST00000504719 PTCH2Q9Y6C5 1203 aa30.65■■■□□ 2.5
PVT1-201ENST00000504719 PSMC4P43686 418 aa30.64■■■□□ 2.5
PVT1-201ENST00000504719 HMGCS2P54868 508 aa30.64■■■□□ 2.5
PVT1-201ENST00000504719 IRX6P78412 446 aaPredicted RBP30.64■■■□□ 2.5
PVT1-201ENST00000504719 SLFNL1Q499Z3 407 aa30.64■■■□□ 2.5
PVT1-201ENST00000504719 ARMC5Q96C12 935 aa30.64■■■□□ 2.5
PVT1-201ENST00000504719 PLCD1P51178 756 aa30.63■■■□□ 2.49
PVT1-201ENST00000504719 TRIM47Q96LD4 638 aa30.63■■■□□ 2.49
PVT1-201ENST00000504719 ECM2O94769 699 aaPredicted RBP30.62■■■□□ 2.49
PVT1-201ENST00000504719 POLR3DP05423 398 aaPredicted RBP30.62■■■□□ 2.49
PVT1-201ENST00000504719 PRMT2P55345 433 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 BACE1P56817 501 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 UBE3CQ15386 1083 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 SDR42E1Q8WUS8 393 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 ARMT1Q9H993 441 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 PNMA3Q9UL41 463 aa30.62■■■□□ 2.49
PVT1-201ENST00000504719 CHGBP05060 677 aa30.61■■■□□ 2.49
PVT1-201ENST00000504719 GPATCH3Q96I76 525 aa30.61■■■□□ 2.49
PVT1-201ENST00000504719 DCP1AQ9NPI6 582 aaPredicted RBP30.61■■■□□ 2.49
PVT1-201ENST00000504719 HDAC1Q13547 482 aaPredicted RBP30.6■■■□□ 2.49
PVT1-201ENST00000504719 MTMR2Q13614 643 aa30.6■■■□□ 2.49
PVT1-201ENST00000504719 SMCR8Q8TEV9 937 aaPredicted RBP30.6■■■□□ 2.49
PVT1-201ENST00000504719 MCM9Q9NXL9 1143 aa30.6■■■□□ 2.49
PVT1-201ENST00000504719 BAZ2AQ9UIF9 1905 aaKnown RBP30.59■■■□□ 2.49
PVT1-201ENST00000504719 C19orf81C9J6K1 198 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 MBD4O95243 580 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 FMNL1O95466 1100 aaPredicted RBP30.59■■■□□ 2.49
PVT1-201ENST00000504719 GH2P01242 217 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 OSBPP22059 807 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 GABPAQ06546 454 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 PABPC4Q13310 644 aaKnown RBP eCLIP30.59■■■□□ 2.49
PVT1-201ENST00000504719 ZSCAN25Q6NSZ9 544 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 SRRDQ9UH36 339 aa30.59■■■□□ 2.49
PVT1-201ENST00000504719 RBBP6Q7Z6E9 1792 aaKnown RBP30.59■■■□□ 2.49
PVT1-201ENST00000504719 USP17L10C9JJH3 530 aa30.58■■■□□ 2.49
PVT1-201ENST00000504719 HOXD10P28358 340 aa30.58■■■□□ 2.49
PVT1-201ENST00000504719 SHMT1P34896 483 aa30.58■■■□□ 2.49
PVT1-201ENST00000504719 CERKLQ49MI3 558 aaPredicted RBP30.58■■■□□ 2.49
PVT1-201ENST00000504719 SLC9C1Q4G0N8 1177 aa30.58■■■□□ 2.49
PVT1-201ENST00000504719 PRKAB2O43741 272 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 FCGRTP55899 365 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 TSHZ3Q63HK5 1081 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 NBPF11Q86T75 865 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 ZNF333Q96JL9 665 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 TMOD4Q9NZQ9 345 aa30.57■■■□□ 2.48
PVT1-201ENST00000504719 CENPFP49454 3210 aa30.56■■■□□ 2.48
PVT1-201ENST00000504719 EVX2Q03828 476 aa30.56■■■□□ 2.48
PVT1-201ENST00000504719 ASCC2Q9H1I8 757 aaPredicted RBP30.56■■■□□ 2.48
PVT1-201ENST00000504719 ATP8A2Q9NTI2 1148 aa30.56■■■□□ 2.48
PVT1-201ENST00000504719 ABCB5Q2M3G0 1257 aa30.55■■■□□ 2.48
PVT1-201ENST00000504719 ANKRD13CQ8N6S4 541 aa30.55■■■□□ 2.48
PVT1-201ENST00000504719 KBTBD3Q8NAB2 608 aa30.55■■■□□ 2.48
PVT1-201ENST00000504719 MYH8P13535 1937 aa30.55■■■□□ 2.48
PVT1-201ENST00000504719 TTC41PQ6P2S7 1318 aa30.54■■■□□ 2.48
PVT1-201ENST00000504719 HOXA7P31268 230 aaPredicted RBP30.54■■■□□ 2.48
PVT1-201ENST00000504719 PUS7LQ9H0K6 701 aaKnown RBP30.54■■■□□ 2.48
PVT1-201ENST00000504719 DOCK3Q8IZD9 2030 aa30.54■■■□□ 2.48
PVT1-201ENST00000504719 MYPNQ86TC9 1320 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 POTEFA5A3E0 1075 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 CYP2D6P10635 497 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 GCLCP48506 637 aaPredicted RBP30.53■■■□□ 2.48
PVT1-201ENST00000504719 FAM110CQ1W6H9 321 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 GCC1Q96CN9 775 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 RWDD1Q9H446 243 aaPredicted RBP30.53■■■□□ 2.48
PVT1-201ENST00000504719 CABP5Q9NP86 173 aa30.53■■■□□ 2.48
PVT1-201ENST00000504719 KIAA0100Q14667 2235 aaKnown RBP30.53■■■□□ 2.48
PVT1-201ENST00000504719 RAB3GAP1Q15042 981 aa30.52■■■□□ 2.48
PVT1-201ENST00000504719 USP17L2Q6R6M4 530 aa30.52■■■□□ 2.48
PVT1-201ENST00000504719 SH3TC2Q8TF17 1288 aa30.52■■■□□ 2.48
PVT1-201ENST00000504719 EMILIN3Q9NT22 766 aa30.52■■■□□ 2.48
PVT1-201ENST00000504719 TNRC18O15417 2968 aaPredicted RBP30.51■■■□□ 2.47
PVT1-201ENST00000504719 RAET1EQ8TD07 263 aa30.51■■■□□ 2.47
PVT1-201ENST00000504719 OTUD7AQ8TE49 926 aaPredicted RBP30.51■■■□□ 2.47
PVT1-201ENST00000504719 TAOK2Q9UL54 1235 aa30.51■■■□□ 2.47
PVT1-201ENST00000504719 GUCY1A2P33402 732 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 IRX3P78415 501 aaPredicted RBP30.5■■■□□ 2.47
PVT1-201ENST00000504719 PRKCZQ05513 592 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 ANKRD45Q5TZF3 282 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 PI4K2BQ8TCG2 481 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 SWAP70Q9UH65 585 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 GABRQQ9UN88 632 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 SLC4A4Q9Y6R1 1079 aa30.5■■■□□ 2.47
PVT1-201ENST00000504719 ERC2O15083 957 aa30.49■■■□□ 2.47
PVT1-201ENST00000504719 IGHDP01880 384 aa30.49■■■□□ 2.47
PVT1-201ENST00000504719 DYNLL2Q96FJ2 89 aa30.49■■■□□ 2.47
PVT1-201ENST00000504719 C12orf42Q96LP6 360 aa30.49■■■□□ 2.47
PVT1-201ENST00000504719 P2RX7Q99572 595 aaKnown RBP30.49■■■□□ 2.47
PVT1-201ENST00000504719 ZBTB47Q9UFB7 747 aaPredicted RBP30.49■■■□□ 2.47
PVT1-201ENST00000504719 RNF113AO15541 343 aaKnown RBP30.48■■■□□ 2.47
PVT1-201ENST00000504719 C12orf60Q5U649 245 aa30.48■■■□□ 2.47
PVT1-201ENST00000504719 SLC44A5Q8NCS7 719 aa30.48■■■□□ 2.47
PVT1-201ENST00000504719 TMEM106CQ9BVX2 250 aa30.48■■■□□ 2.47
PVT1-201ENST00000504719 USP17L12C9JPN9 530 aa30.47■■■□□ 2.47
PVT1-201ENST00000504719 USP17L21D6R901 530 aa30.47■■■□□ 2.47
PVT1-201ENST00000504719 TNPO2O14787 897 aaKnown RBP30.47■■■□□ 2.47
PVT1-201ENST00000504719 GLRX3O76003 335 aaKnown RBP30.47■■■□□ 2.47
PVT1-201ENST00000504719 GRK4P32298 578 aa30.47■■■□□ 2.47
PVT1-201ENST00000504719 USP14P54578 494 aa30.47■■■□□ 2.47
PVT1-201ENST00000504719 SEPT2Q15019 361 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms