RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 LHX8Q68G74 356 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 FOXP4Q8IVH2 680 aaPredicted RBP20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 TXNRD2Q9NNW7 524 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 LRP2BPQ9P2M1 347 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 ALPK3Q96L96 1907 aa20.42■□□□□ 0.86
SUPT20H-223ENST00000497318 POTEB2H3BUK9 544 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 ERVK-24P63145 666 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 TBC1D9Q6ZT07 1266 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 CRACR2BQ8N4Y2 399 aaPredicted RBP20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 USP6NLQ92738 828 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 APBA2Q99767 749 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 RBPJLQ9UBG7 517 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 PRKAG2Q9UGJ0 569 aa20.41■□□□□ 0.86
SUPT20H-223ENST00000497318 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
SUPT20H-223ENST00000497318 CCNA1P78396 465 aa20.4■□□□□ 0.86
SUPT20H-223ENST00000497318 MFSD14CQ5VZR4 134 aa20.4■□□□□ 0.86
SUPT20H-223ENST00000497318 GPR142Q7Z601 462 aa20.4■□□□□ 0.86
SUPT20H-223ENST00000497318 DDX60LQ5H9U9 1706 aaKnown RBP20.39■□□□□ 0.86
SUPT20H-223ENST00000497318 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 CCND3P30281 292 aaPredicted RBP20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 MORN1Q5T089 497 aa20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 ATF7IPQ6VMQ6 1270 aa20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 SH3RF3Q8TEJ3 882 aaPredicted RBP20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 NOB1Q9ULX3 412 aaKnown RBP20.39■□□□□ 0.85
SUPT20H-223ENST00000497318 MSCO60682 206 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 GNAI3P08754 354 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 SLFN5Q08AF3 891 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 MAP2K5Q13163 448 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 Q3C1V9 767 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 EDC3Q96F86 508 aaKnown RBP20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 SENP6Q9GZR1 1112 aaPredicted RBP20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 LOC285556D6RIA3 1793 aa20.38■□□□□ 0.85
SUPT20H-223ENST00000497318 PEX10O60683 326 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 ARID4AP29374 1257 aaPredicted RBP20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 CCL14Q16627 93 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 ZNF697Q5TEC3 545 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 NAA16Q6N069 864 aaPredicted RBP20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L2Q6R6M4 530 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 PI16Q6UXB8 463 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 PORCNQ9H237 461 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 RABGAP1Q9Y3P9 1069 aa20.37■□□□□ 0.85
SUPT20H-223ENST00000497318 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
SUPT20H-223ENST00000497318 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
SUPT20H-223ENST00000497318 TGFBRAP1Q8WUH2 860 aa20.36■□□□□ 0.85
SUPT20H-223ENST00000497318 GUCD1Q96NT3 240 aa20.36■□□□□ 0.85
SUPT20H-223ENST00000497318 MEIS3Q99687 375 aa20.36■□□□□ 0.85
SUPT20H-223ENST00000497318 UNC80Q8N2C7 3258 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 SLC15A5A6NIM6 579 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 HLA-DOAP06340 250 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 PPP4CP60510 307 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 ATP2B2Q01814 1243 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 MAPKAPK5Q8IW41 473 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 FAM161BQ96MY7 647 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 AATFQ9NY61 560 aaKnown RBP eCLIP20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 ZBTB21Q9ULJ3 1066 aa20.35■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L15C9J2P7 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L13C9JLJ4 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L11C9JVI0 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L18D6R9N7 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L22D6RA61 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L17D6RBQ6 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L19D6RCP7 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L20D6RJB6 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 IGSF3O75054 1194 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 GDF11O95390 407 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 CNGA1P29973 690 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 USP17L24Q0WX57 530 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 G3BP1Q13283 466 aaKnown RBP eCLIP20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 MTX1Q13505 466 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 WDR78Q5VTH9 848 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 LPAR1Q92633 364 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 FEZ1Q99689 392 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 EMILIN3Q9NT22 766 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 DDX20Q9UHI6 824 aaKnown RBP20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 IVNS1ABPQ9Y6Y0 642 aa20.34■□□□□ 0.85
SUPT20H-223ENST00000497318 MCAMP43121 646 aa20.33■□□□□ 0.85
SUPT20H-223ENST00000497318 JAG1P78504 1218 aa20.33■□□□□ 0.85
SUPT20H-223ENST00000497318 PALD1Q9ULE6 856 aa20.33■□□□□ 0.85
SUPT20H-223ENST00000497318 FLT1P17948 1338 aa20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 DNM1LO00429 736 aa20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 ATN1P54259 1190 aaPredicted RBP20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 USP14P54578 494 aa20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 ARRDC4Q8NCT1 418 aa20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 DNAJC18Q9H819 358 aa20.32■□□□□ 0.84
SUPT20H-223ENST00000497318 PTPREP23469 700 aa20.31■□□□□ 0.84
SUPT20H-223ENST00000497318 CCDC158Q5M9N0 1113 aa20.31■□□□□ 0.84
SUPT20H-223ENST00000497318 PLXNB2O15031 1838 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 GH2P01242 217 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 HOXC6P09630 235 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 TTC39AQ5SRH9 613 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 C12orf42Q96LP6 360 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 CDX2Q99626 313 aaPredicted RBP20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 SAP30BPQ9UHR5 308 aaKnown RBP20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 NDUFB9Q9Y6M9 179 aa20.3■□□□□ 0.84
SUPT20H-223ENST00000497318 RTP1P59025 263 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms