RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 EPSTI1Q96J88 318 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 MYH13Q9UKX3 1938 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 DDX60Q8IY21 1712 aaKnown RBP13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 HIBADHP31937 336 aaKnown RBP13.25□□□□□ -0.29
CDCA7-208ENST00000496441 UBASH3AP57075 661 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CCZ1BP86790 482 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CCZ1P86791 482 aaPredicted RBP13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 OLFM4Q6UX06 510 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 CSRNP2Q9H175 543 aa13.25□□□□□ -0.29
CDCA7-208ENST00000496441 TMEM232C9JQI7 657 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 PTPN14Q15678 1187 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
CDCA7-208ENST00000496441 KLHL34Q8N239 644 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 HPSEQ9Y251 543 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 TSPY2A6NKD2 308 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 CUTAO60888 179 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
CDCA7-208ENST00000496441 BMP6P22004 513 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDCA7-208ENST00000496441 CDC25BP30305 580 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
CDCA7-208ENST00000496441 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
CDCA7-208ENST00000496441 STX17P56962 302 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 RBM6P78332 1123 aaKnown RBP13.23□□□□□ -0.29
CDCA7-208ENST00000496441 SEC23AQ15436 765 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
CDCA7-208ENST00000496441 CCDC112Q8NEF3 446 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
CDCA7-208ENST00000496441 DYNLL2Q96FJ2 89 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 ADAMTS3O15072 1205 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 SMYD4Q8IYR2 804 aaPredicted RBP13.23□□□□□ -0.29
CDCA7-208ENST00000496441 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 CDC25AP30304 524 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
CDCA7-208ENST00000496441 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
CDCA7-208ENST00000496441 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 MYL5Q02045 173 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 POSTNQ15063 836 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 SF3B3Q15393 1217 aaKnown RBP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 GLIPR1L2Q4G1C9 344 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 SAP30BPQ9UHR5 308 aaKnown RBP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 MYH6P13533 1939 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 CBX1P83916 185 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 NFIXQ14938 502 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 PKN1Q16512 942 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
CDCA7-208ENST00000496441 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 GPKOWQ92917 476 aaPredicted RBP eCLIP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 DCP1AQ9NPI6 582 aaPredicted RBP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
CDCA7-208ENST00000496441 USP5P45974 858 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 GRIK5Q16478 980 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 PIK3AP1Q6ZUJ8 805 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
CDCA7-208ENST00000496441 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.29
CDCA7-208ENST00000496441 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
CDCA7-208ENST00000496441 UTRNP46939 3433 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 STK36Q9NRP7 1315 aa13.21□□□□□ -0.29
CDCA7-208ENST00000496441 XBP1P17861 261 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 MCM7P33993 719 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 FMR1Q06787 632 aaKnown RBP eCLIP13.21□□□□□ -0.3
CDCA7-208ENST00000496441 RASGRP2Q7LDG7 609 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 CCAR2Q8N163 923 aaKnown RBP13.21□□□□□ -0.3
CDCA7-208ENST00000496441 SLC44A5Q8NCS7 719 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.3
CDCA7-208ENST00000496441 RASGRP4Q8TDF6 673 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 CPVLQ9H3G5 476 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 TUBE1Q9UJT0 475 aa13.21□□□□□ -0.3
CDCA7-208ENST00000496441 A0A087X0B3 334 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 PTPREP23469 700 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 RFC4P35249 363 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 KRT2P35908 639 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
CDCA7-208ENST00000496441 SMARCE1Q969G3 411 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
CDCA7-208ENST00000496441 MAN1B1Q9UKM7 699 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 DOCK2Q92608 1830 aa13.2□□□□□ -0.3
CDCA7-208ENST00000496441 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
CDCA7-208ENST00000496441 NLRP5P59047 1200 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms