RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	AMOTL1	Q8IY63	956 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	APPBP2	Q92624	585 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	ABHD8	Q96I13	439 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	FSD1	Q9BTV5	496 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	SLC4A4	Q9Y6R1	1079 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	AK9	Q5TCS8	1911 aa		13.33	□□□□□ -0.27
GGA1-222	ENST00000489772	TLR2	O60603	784 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	GDF11	O95390	407 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	SP3	Q02447	781 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	NUCB1	Q02818	461 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	PKN2	Q16513	984 aa	Known RBP	13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	CERKL	Q49MI3	558 aa	Predicted RBP	13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	GADL1	Q6ZQY3	521 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	ERO1A	Q96HE7	468 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	PARK7	Q99497	189 aa	Known RBP	13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	TAOK2	Q9UL54	1235 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	GPAT2	Q6NUI2	795 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	OSBP2	Q969R2	916 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	EVI5L	Q96CN4	794 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	STRBP	Q96SI9	672 aa	Known RBP	13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	WDR18	Q9BV38	432 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	FOXD4L1	Q9NU39	408 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	ZBTB21	Q9ULJ3	1066 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	SLC45A1	Q9Y2W3	748 aa		13.32	□□□□□ -0.28
GGA1-222	ENST00000489772	GH2	P01242	217 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	CYP2D6	P10635	497 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	GNAT2	P19087	354 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	JAG1	P78504	1218 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	GABPA	Q06546	454 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	ARHGEF6	Q15052	776 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	ABCB5	Q2M3G0	1257 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	CABP5	Q9NP86	173 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	SWAP70	Q9UH65	585 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	AGTPBP1	Q9UPW5	1226 aa		13.31	□□□□□ -0.28
GGA1-222	ENST00000489772	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	USP17L12	C9JPN9	530 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	USP17L21	D6R901	530 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	GPAA1	O43292	621 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	SHMT1	P34896	483 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	HMGCS2	P54868	508 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	BACE1	P56817	501 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	RAB3GAP1	Q15042	981 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	GIMAP6	Q6P9H5	292 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	CD99L2	Q8TCZ2	262 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	TMOD4	Q9NZQ9	345 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	PNMA3	Q9UL41	463 aa		13.3	□□□□□ -0.28
GGA1-222	ENST00000489772	LAMB1	P07942	1786 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	C19orf81	C9J6K1	198 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	USP17L10	C9JJH3	530 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772		M0R2C6	588 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	APP	P05067	770 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	CYP2C8	P10632	490 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	MTMR2	Q13614	643 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	KIF22	Q14807	665 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	SH3D19	Q5HYK7	790 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	C12orf60	Q5U649	245 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	C17orf99	Q6UX52	265 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	TICAM2	Q86XR7	235 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	EFCC1	Q9HA90	598 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	CPA4	Q9UI42	421 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	TRIM17	Q9Y577	477 aa		13.29	□□□□□ -0.28
GGA1-222	ENST00000489772	CCDC85C	A6NKD9	419 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	GSG1L2	A8MUP6	293 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	TRIM6-TRIM34	B2RNG4	842 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	PATL2	C9JE40	543 aa	Known RBP	13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	MPHOSPH10	O00566	681 aa	Known RBP	13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	EVX2	Q03828	476 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	ZMYM1	Q5SVZ6	1142 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	TREML2	Q5T2D2	321 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	CTR9	Q6PD62	1173 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	OTOP1	Q7RTM1	612 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	PLEKHM2	Q8IWE5	1019 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	PIP4P2	Q8N4L2	257 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	DYNLL2	Q96FJ2	89 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	NACAP1	Q9BZK3	213 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	OSBPL3	Q9H4L5	887 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	CASP8AP2	Q9UKL3	1982 aa		13.28	□□□□□ -0.28
GGA1-222	ENST00000489772	FOCAD	Q5VW36	1801 aa		13.27	□□□□□ -0.28
GGA1-222	ENST00000489772	CYP2D7	A0A087X1C5	515 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	OSBP	P22059	807 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	TDO2	P48775	406 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	LACTB	P83111	547 aa	Predicted RBP	13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	SBK1	Q52WX2	424 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	SLC44A5	Q8NCS7	719 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	SEC62	Q99442	399 aa	Known RBP	13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	FEZ1	Q99689	392 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	DOCK1	Q14185	1865 aa		13.27	□□□□□ -0.29
GGA1-222	ENST00000489772	CDK8	P49336	464 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	USP17L2	Q6R6M4	530 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	TMEM179	Q6ZVK1	233 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	C16orf86	Q6ZW13	317 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	RILPL2	Q969X0	211 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	CCDC17	Q96LX7	622 aa		13.26	□□□□□ -0.29
GGA1-222	ENST00000489772	HPS5	Q9UPZ3	1129 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms