RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PLXNB2O15031 1838 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 POLR2AP24928 1970 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 A0A0G2JLL6 359 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 ANKRD18BA2A2Z9 1011 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 NEURL1BA8MQ27 555 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 USP17L5A8MUK1 530 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 ADM5C9JUS6 153 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 ATP9BO43861 1147 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 USP2O75604 605 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 RIPK4P57078 832 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 KCNC4Q03721 635 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 DUSP27Q5VZP5 1158 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 PRRT2Q7Z6L0 340 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 MSL3Q8N5Y2 521 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 FAM151AQ8WW52 585 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 CELF1Q92879 486 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 ZNF512BQ96KM6 892 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 C12orf42Q96LP6 360 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 TEPSINQ96N21 525 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 CD209Q9NNX6 404 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 NOVA2Q9UNW9 492 aaKnown RBP3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 ATAD5Q96QE3 1844 aa3.44□□□□□ -1.86
DEPDC1-203ENST00000488146 RAD17O75943 681 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 COPS2P61201 443 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 LACTBP83111 547 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 SMAD3P84022 425 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 PTPN12Q05209 780 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 MTMR3Q13615 1198 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 SNX17Q15036 470 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 MAP3K21Q5TCX8 1036 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 RETREG3Q86VR2 466 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 OCSTAMPQ9BR26 566 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 WDR18Q9BV38 432 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 TMOD2Q9NZR1 351 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 TSR3Q9UJK0 312 aaKnown RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 OGDHLQ9ULD0 1010 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 CSADQ9Y600 493 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 ALPK3Q96L96 1907 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 TLL1O43897 1013 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 FAM110CQ1W6H9 321 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 SPTY2D1Q68D10 685 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 CCDC174Q6PII3 467 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 CAPN12Q6ZSI9 719 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 ABRAQ8N0Z2 381 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 SHCBP1Q8NEM2 672 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 GDF15Q99988 308 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 STK31Q9BXU1 1019 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 DEFB129Q9H1M3 183 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 ZNF70Q9UC06 446 aaPredicted RBP3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 USTQ9Y2C2 406 aa3.43□□□□□ -1.86
DEPDC1-203ENST00000488146 TRPA1O75762 1119 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 ATG7O95352 703 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 RASA1P20936 1047 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 HOXA7P31268 230 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 TNNT2P45379 298 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 RAB15P59190 212 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 TAGLNQ01995 201 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 MOGSQ13724 837 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 TBC1D10BQ4KMP7 808 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 AKNAD1Q5T1N1 836 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 SND1Q7KZF4 910 aaKnown RBP eCLIP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 SCUBE3Q8IX30 993 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 SHISA4Q96DD7 197 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 GPR108Q9NPR9 543 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 CHPF2Q9P2E5 772 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 KIAA1024Q9UPX6 916 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 PCDHB9Q9Y5E1 797 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 SNCAIPQ9Y6H5 919 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 MAGEB6P1A0A0J9YX57 407 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 ZBBXA8MT70 800 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 PRMT3O60678 531 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 CTNND1O60716 968 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 STAU1O95793 577 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 COL6A1P12109 1028 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 POU3F3P20264 500 aaPredicted RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 FGFR2P21802 821 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 GSTO1P78417 241 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 KCNA1Q09470 495 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 ALDH1L2Q3SY69 923 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 CC2D1BQ5T0F9 858 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 OLFML2BQ68BL8 750 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 BRI3BPQ8WY22 251 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 MKNK1Q9BUB5 465 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 AS3MTQ9HBK9 375 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 ANKIB1Q9P2G1 1089 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 HERC5Q9UII4 1024 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 FKBPLQ9UIM3 349 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 NSFL1CQ9UNZ2 370 aaKnown RBP3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 TRIM17Q9Y577 477 aa3.42□□□□□ -1.86
DEPDC1-203ENST00000488146 C19orf81C9J6K1 198 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 IGF2BP3O00425 579 aaKnown RBP eCLIP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 SGPL1O95470 568 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 HMGCRP04035 888 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 GPTP24298 496 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 FOXO4P98177 505 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 NR1H3Q13133 447 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 CRHR2Q13324 411 aa3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 ZNF211Q13398 564 aaPredicted RBP3.41□□□□□ -1.86
DEPDC1-203ENST00000488146 WDR43Q15061 677 aaKnown RBP eCLIP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms