RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SCN9AQ15858 1988 aa8.21□□□□□ -1.09
UBR4-214ENST00000486515 TSPY2A6NKD2 308 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 SOX1O00570 391 aaPredicted RBP8.21□□□□□ -1.1
UBR4-214ENST00000486515 EN2P19622 333 aaPredicted RBP8.21□□□□□ -1.1
UBR4-214ENST00000486515 RASA3Q14644 834 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 SLC4A8Q2Y0W8 1093 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 CCDC178Q5BJE1 867 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 AKNAD1Q5T1N1 836 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 BLOC1S2Q6QNY1 142 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 CDC37L1Q7L3B6 337 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 KRT26Q7Z3Y9 468 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 STK11IPQ8N1F8 1099 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 JAKMIP1Q96N16 626 aaKnown RBP8.21□□□□□ -1.1
UBR4-214ENST00000486515 NEK1Q96PY6 1258 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 UBAC1Q9BSL1 405 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 DEFB129Q9H1M3 183 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.21□□□□□ -1.1
UBR4-214ENST00000486515 CABP5Q9NP86 173 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 HERC5Q9UII4 1024 aaKnown RBP8.21□□□□□ -1.1
UBR4-214ENST00000486515 PALD1Q9ULE6 856 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 CYP46A1Q9Y6A2 500 aa8.21□□□□□ -1.1
UBR4-214ENST00000486515 PSME4Q14997 1843 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 MPHOSPH10O00566 681 aaKnown RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 RANBP6O60518 1105 aaKnown RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 WDHD1O75717 1129 aaPredicted RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 SEC24BO95487 1268 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 CYP21A2P08686 494 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 TSPY3P0CV98 308 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 TSPY8P0CW00 308 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 CASTP20810 708 aaKnown RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 KIF23Q02241 960 aaPredicted RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 TTLL12Q14166 644 aaPredicted RBP8.2□□□□□ -1.1
UBR4-214ENST00000486515 NECTIN1Q15223 517 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 RABEP1Q15276 862 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 ANKRD1Q15327 319 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 C12orf60Q5U649 245 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 SYNE3Q6ZMZ3 975 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 DEFB123Q8N688 67 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 TRPM4Q8TD43 1214 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 TTC28Q96AY4 2481 aa8.2□□□□□ -1.1
UBR4-214ENST00000486515 SHTN1A0MZ66 631 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 E7EWF7 191 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 MCM5P33992 734 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 CTDSPL2Q05D32 466 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 NFIAQ12857 509 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 BECN1Q14457 450 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 NFXL1Q6ZNB6 911 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 ZNF296Q8WUU4 475 aaPredicted RBP8.19□□□□□ -1.1
UBR4-214ENST00000486515 STAG1Q8WVM7 1258 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 CHMP4CQ96CF2 233 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 ZBED3Q96IU2 234 aaPredicted RBP8.19□□□□□ -1.1
UBR4-214ENST00000486515 CCDC17Q96LX7 622 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 EHD4Q9H223 541 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 IL25Q9H293 177 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
UBR4-214ENST00000486515 DDX4Q9NQI0 724 aaKnown RBP8.19□□□□□ -1.1
UBR4-214ENST00000486515 FAM198AQ9UFP1 575 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 ANAPC4Q9UJX5 808 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
UBR4-214ENST00000486515 TMEM265A0A087WTH1 108 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 HSP90AA1P07900 732 aaKnown RBP8.18□□□□□ -1.1
UBR4-214ENST00000486515 IREB2P48200 963 aaKnown RBP8.18□□□□□ -1.1
UBR4-214ENST00000486515 MCM2P49736 904 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 NEK4P51957 841 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 CERKLQ49MI3 558 aaPredicted RBP8.18□□□□□ -1.1
UBR4-214ENST00000486515 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 DHX32Q7L7V1 743 aaKnown RBP8.18□□□□□ -1.1
UBR4-214ENST00000486515 ARMC9Q7Z3E5 817 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 USP48Q86UV5 1035 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 HSCBQ8IWL3 235 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 TMTC2Q8N394 836 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 ZNF341Q9BYN7 854 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 TM6SF1Q9BZW5 370 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 TMEM39BQ9GZU3 492 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 ZNF408Q9H9D4 720 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 PDRG1Q9NUG6 133 aa8.18□□□□□ -1.1
UBR4-214ENST00000486515 NAP1L2Q9ULW6 460 aaPredicted RBP8.18□□□□□ -1.1
UBR4-214ENST00000486515 CYP2D7A0A087X1C5 515 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 DDTLA6NHG4 134 aaPredicted RBP8.17□□□□□ -1.1
UBR4-214ENST00000486515 CCDC69A6NI79 296 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 FAM155AB1AL88 458 aaPredicted RBP8.17□□□□□ -1.1
UBR4-214ENST00000486515 B4E1Z4 1266 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 IFIT3O14879 490 aaKnown RBP8.17□□□□□ -1.1
UBR4-214ENST00000486515 TBC1D12O60347 775 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 KDM4AO75164 1064 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 EGFRP00533 1210 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 CDK8P49336 464 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 PLCD1P51178 756 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 HIRAP54198 1017 aaPredicted RBP8.17□□□□□ -1.1
UBR4-214ENST00000486515 HUNKP57058 714 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 TFAP4Q01664 338 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 RUFY3Q7L099 469 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
UBR4-214ENST00000486515 DYNLL2Q96FJ2 89 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms