RNA–Protein interactions for RNA: ENST00000475057.5

SUPT3H-205, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 1,377 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-205ENST00000475057 BRAPQ7Z569 592 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 FMR1NBQ8N0W7 255 aaPredicted RBP8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 MRPS27Q92552 414 aaKnown RBP8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 SDF4Q9BRK5 362 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 TUBB2BQ9BVA1 445 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 NMRK2Q9NPI5 230 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 PHLPP2Q6ZVD8 1323 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 SALL1Q9NSC2 1324 aa8.56□□□□□ -1.04
SUPT3H-205ENST00000475057 ZNF609O15014 1411 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 C6orf229H3BNL8 230 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 SMAPO00193 183 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 TUBBP07437 444 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 H2AFXP16104 143 aaPredicted RBP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 SFPQP23246 707 aaKnown RBP eCLIP8.55□□□□□ -1.043e-6■■□□□ 13.4
SUPT3H-205ENST00000475057 MARSP56192 900 aaKnown RBP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 NLRP12P59046 1061 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 PTPN12Q05209 780 aaKnown RBP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 PROSER3Q2NL68 480 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 CCDC93Q567U6 631 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 SMIM5Q71RC9 77 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 JMYQ8N9B5 988 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 FSIP1Q8NA03 581 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 USP28Q96RU2 1077 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 GOLPH3LQ9H4A5 285 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 KIAA1468Q9P260 1216 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 CCNL1Q9UK58 526 aaPredicted RBP8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 TAF6LQ9Y6J9 622 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 WDR19Q8NEZ3 1342 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 C5P01031 1676 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 LY75O60449 1722 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 ARFGEF2Q9Y6D5 1785 aa8.55□□□□□ -1.04
SUPT3H-205ENST00000475057 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 CTDNEP1O95476 244 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 ETF1P62495 437 aaKnown RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 CT47A1Q5JQC4 288 aaPredicted RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 DDX11Q96FC9 970 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 TCEANC2Q96MN5 208 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 MPHOSPH8Q99549 860 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 HOOK1Q9UJC3 728 aaKnown RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 DBNLQ9UJU6 430 aaKnown RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 ZNF215Q9UL58 517 aaPredicted RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 DDX60Q8IY21 1712 aaKnown RBP8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 ERBB3P21860 1342 aa8.54□□□□□ -1.04
SUPT3H-205ENST00000475057 LAMB4A4D0S4 1761 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 EFCAB8A8MWE9 144 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L12C9JPN9 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L21D6R901 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 CMA1P23946 247 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 PDIA3P30101 505 aaKnown RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 ME1P48163 572 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 TFCP2Q12800 502 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 NR1H3Q13133 447 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 COL9A3Q14050 684 aaPredicted RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 SF3A1Q15459 793 aaKnown RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 TMCO3Q6UWJ1 677 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 NBPF11Q86T75 865 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 AMIGO3Q86WK7 504 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 MSL3Q8N5Y2 521 aaKnown RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 AOPEPQ8N6M6 819 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 LINC00301Q8NCQ3 95 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 UBXN4Q92575 508 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 ZBED2Q9BTP6 218 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 PCDHA7Q9UN72 937 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 USP16Q9Y5T5 823 aa8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
SUPT3H-205ENST00000475057 MYH7P12883 1935 aa8.52□□□□□ -1.04
SUPT3H-205ENST00000475057 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 USP27XA6NNY8 438 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 E7EWF7 191 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 ZFYP08048 801 aaPredicted RBP8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 SLC3A2P08195 630 aaKnown RBP8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 SLC10A3P09131 477 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 SKIP12755 728 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 ZNF790Q6PG37 636 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 SYNE3Q6ZMZ3 975 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 NPAS4Q8IUM7 802 aa8.52□□□□□ -1.05
SUPT3H-205ENST00000475057 DEPDC4Q8N2C3 294 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms