RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ARNTL2Q8WYA1 636 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-206ENST00000471968 UPF3BQ9BZI7 483 aaKnown RBP8.64□□□□□ -1.03
HDAC3-206ENST00000471968 MTIF3Q9H2K0 278 aaKnown RBP8.64□□□□□ -1.03
HDAC3-206ENST00000471968 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 TMOD2Q9NZR1 351 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 FLRT1Q9NZU1 646 aa8.64□□□□□ -1.03
HDAC3-206ENST00000471968 KDM4AO75164 1064 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 CA3P07451 260 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 IL1R1P14778 569 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 PTPRAP18433 802 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 IRS1P35568 1242 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 PUM1Q14671 1186 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC3-206ENST00000471968 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 FBXL6Q8N531 539 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 TRPV1Q8NER1 839 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 PLBD2Q8NHP8 589 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 EDAQ92838 391 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 NKD2Q969F2 451 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-206ENST00000471968 MORF4L1Q9UBU8 362 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 PCDHA11Q9Y5I1 949 aa8.63□□□□□ -1.03
HDAC3-206ENST00000471968 EP300Q09472 2414 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-206ENST00000471968 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-206ENST00000471968 DCDC2CA8MYV0 355 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 SNAP23O00161 211 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 DSG3P32926 999 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 CYP2C19P33261 490 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 NBL1P41271 181 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 GRB10Q13322 594 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 LRRC41Q15345 812 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 HERC4Q5GLZ8 1057 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-206ENST00000471968 MORN1Q5T089 497 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 OTOP2Q7RTS6 562 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 GPR142Q7Z601 462 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 CCAR1Q8IX12 1150 aaKnown RBP8.62□□□□□ -1.03
HDAC3-206ENST00000471968 SCYL3Q8IZE3 742 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 TMEM199Q8N511 208 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 TDRD7Q8NHU6 1098 aaKnown RBP8.62□□□□□ -1.03
HDAC3-206ENST00000471968 CHAMP1Q96JM3 812 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 ANKRD2Q9GZV1 360 aa8.62□□□□□ -1.03
HDAC3-206ENST00000471968 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 HTATSF1O43719 755 aaKnown RBP8.61□□□□□ -1.03
HDAC3-206ENST00000471968 ZIC2O95409 532 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-206ENST00000471968 MAPK4P31152 587 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 MAP2K5Q13163 448 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 CCDC84Q86UT8 332 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-206ENST00000471968 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 ASCC2Q9H1I8 757 aaPredicted RBP8.61□□□□□ -1.03
HDAC3-206ENST00000471968 KMT2EQ8IZD2 1858 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 SPEF2Q9C093 1822 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 CEP250Q9BV73 2442 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 FRYLO94915 3013 aa8.61□□□□□ -1.03
HDAC3-206ENST00000471968 FGBP02675 491 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 ATP2B2Q01814 1243 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
HDAC3-206ENST00000471968 TMEM67Q5HYA8 995 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 FRMD5Q7Z6J6 570 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 PLEKHH3Q7Z736 793 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 GPRC5AQ8NFJ5 357 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 EDC3Q96F86 508 aaKnown RBP8.6□□□□□ -1.03
HDAC3-206ENST00000471968 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 PORCNQ9H237 461 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 GREM2Q9H772 168 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
HDAC3-206ENST00000471968 TXNRD2Q9NNW7 524 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 IL23AQ9NPF7 189 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-206ENST00000471968 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
HDAC3-206ENST00000471968 TBX21Q9UL17 535 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
HDAC3-206ENST00000471968 H3BQ06 376 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 LPXNO60711 386 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 CYBAP13498 195 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 AVPR2P30518 371 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 IGHMBP2P38935 993 aaKnown RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 CTSWP56202 376 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 TCP10Q12799 353 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 TRIM28Q13263 835 aaKnown RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 AMER1Q5JTC6 1135 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 FKBP1CQ5VVH2 108 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 ANKRD33Q7Z3H0 272 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 ADHFE1Q8IWW8 467 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 KIAA2013Q8IYS2 634 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 PROCA1Q8NCQ7 364 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 TOX2Q96NM4 488 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 SPINK5Q9NQ38 1064 aaPredicted RBP8.59□□□□□ -1.03
HDAC3-206ENST00000471968 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 SLC4A7Q9Y6M7 1214 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
HDAC3-206ENST00000471968 A0A1W2PQ45 241 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-206ENST00000471968 A0A1W2PQY0 241 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 ZBBXA8MT70 800 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 PHF20L1A8MW92 1017 aa8.58□□□□□ -1.04
HDAC3-206ENST00000471968 ATP2A2P16615 1042 aaKnown RBP8.58□□□□□ -1.04
HDAC3-206ENST00000471968 CHRNDQ07001 517 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms