RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 PLEKHH3Q7Z736 793 aa23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 PI4KBQ9UBF8 816 aa23.42■■□□□ 1.34
NCKIPSD-209ENST00000470006 DNAH12Q6ZR08 3092 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 ASNSP08243 561 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 ERVK-9P63128 1117 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 ERVK-24P63145 666 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 Q3C1V9 767 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 ZNF384Q8TF68 577 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 NSUN4Q96CB9 384 aaKnown RBP23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 COPRSQ9NQ92 184 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 SMC4Q9NTJ3 1288 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 RBPJLQ9UBG7 517 aa23.41■■□□□ 1.34
NCKIPSD-209ENST00000470006 C19orf81C9J6K1 198 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 USP17L10C9JJH3 530 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 ATN1P54259 1190 aaPredicted RBP23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 TFCP2Q12800 502 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 WDR78Q5VTH9 848 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 CRACR2BQ8N4Y2 399 aaPredicted RBP23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 SPATA5Q8NB90 893 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 APBA2Q99767 749 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 PORCNQ9H237 461 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 HMG20BQ9P0W2 317 aa23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 COL2A1P02458 1487 aaPredicted RBP23.4■■□□□ 1.34
NCKIPSD-209ENST00000470006 CNGA1P29973 690 aa23.39■■□□□ 1.33
NCKIPSD-209ENST00000470006 PI16Q6UXB8 463 aa23.39■■□□□ 1.33
NCKIPSD-209ENST00000470006 SH3RF3Q8TEJ3 882 aaPredicted RBP23.39■■□□□ 1.33
NCKIPSD-209ENST00000470006 DHX36Q9H2U1 1008 aaKnown RBP23.39■■□□□ 1.33
NCKIPSD-209ENST00000470006 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.33
NCKIPSD-209ENST00000470006 GDF11O95390 407 aa23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 MORN1Q5T089 497 aa23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 MFSD14CQ5VZR4 134 aa23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 GTF3C2Q8WUA4 911 aaPredicted RBP23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 USP6NLQ92738 828 aa23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 NDUFB9Q9Y6M9 179 aa23.38■■□□□ 1.33
NCKIPSD-209ENST00000470006 GLRX3O76003 335 aaKnown RBP23.37■■□□□ 1.33
NCKIPSD-209ENST00000470006 EDC3Q96F86 508 aaKnown RBP23.37■■□□□ 1.33
NCKIPSD-209ENST00000470006 BAG3O95817 575 aa23.36■■□□□ 1.33
NCKIPSD-209ENST00000470006 AATFQ9NY61 560 aaKnown RBP eCLIP23.36■■□□□ 1.33
NCKIPSD-209ENST00000470006 E9PSI1 815 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 CCNA1P78396 465 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 JAG1P78504 1218 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 MAP2K5Q13163 448 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 ALDH1L2Q3SY69 923 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 MAPKAPK5Q8IW41 473 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 TGFBRAP1Q8WUH2 860 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 CDX2Q99626 313 aaPredicted RBP23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 FRMPD3Q5JV73 1810 aa23.35■■□□□ 1.33
NCKIPSD-209ENST00000470006 SRGAP3O43295 1099 aa23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 ATP2B2Q01814 1243 aa23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 SHROOM1Q2M3G4 852 aaPredicted RBP23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 USP17L2Q6R6M4 530 aa23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 FOXP4Q8IVH2 680 aaPredicted RBP23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 MAFAQ8NHW3 353 aaPredicted RBP23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 DDX20Q9UHI6 824 aaKnown RBP23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 ATP11BQ9Y2G3 1177 aa23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 VCANP13611 3396 aa23.34■■□□□ 1.33
NCKIPSD-209ENST00000470006 ZNF521Q96K83 1311 aa23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 PLCG2P16885 1265 aa23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 RTP1P59025 263 aa23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 ZYXQ15942 572 aaKnown RBP23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 NAA16Q6N069 864 aaPredicted RBP23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 ZBTB21Q9ULJ3 1066 aa23.33■■□□□ 1.33
NCKIPSD-209ENST00000470006 MSCO60682 206 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 LPAR1Q92633 364 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 MEIS3Q99687 375 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 FEZ1Q99689 392 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 PRDM5Q9NQX1 630 aaPredicted RBP23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 EMILIN3Q9NT22 766 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 GINM1Q9NU53 330 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 PALD1Q9ULE6 856 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 NOB1Q9ULX3 412 aaKnown RBP23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 RABGAP1Q9Y3P9 1069 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 IVNS1ABPQ9Y6Y0 642 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 MAST2Q6P0Q8 1798 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 EYSQ5T1H1 3165 aa23.32■■□□□ 1.32
NCKIPSD-209ENST00000470006 MYCNP04198 464 aaPredicted RBP23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 SHHQ15465 462 aa23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 SEMA6BQ9H3T3 888 aa23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 FLRT1Q9NZU1 646 aa23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 SAP30BPQ9UHR5 308 aaKnown RBP23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 SIPA1L1O43166 1804 aa23.31■■□□□ 1.32
NCKIPSD-209ENST00000470006 DNM1LO00429 736 aa23.3■■□□□ 1.32
NCKIPSD-209ENST00000470006 HLA-DOAP06340 250 aa23.3■■□□□ 1.32
NCKIPSD-209ENST00000470006 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
NCKIPSD-209ENST00000470006 DNAJC18Q9H819 358 aa23.3■■□□□ 1.32
NCKIPSD-209ENST00000470006 FLT1P17948 1338 aa23.3■■□□□ 1.32
NCKIPSD-209ENST00000470006 SLC15A5A6NIM6 579 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L15C9J2P7 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L13C9JLJ4 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L11C9JVI0 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L18D6R9N7 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L22D6RA61 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L17D6RBQ6 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L19D6RCP7 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 USP17L20D6RJB6 530 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 UQCRFS1P1P0C7P4 283 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 PTPREP23469 700 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 ARID4AP29374 1257 aaPredicted RBP23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 CYP2C19P33261 490 aa23.29■■□□□ 1.32
NCKIPSD-209ENST00000470006 MCAMP43121 646 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms