RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 AS3MTQ9HBK9 375 aa14.7□□□□□ -0.06
HCFC1-204ENST00000461098 HERC5Q9UII4 1024 aaKnown RBP14.7□□□□□ -0.06
HCFC1-204ENST00000461098 LTBP2Q14767 1821 aa14.69□□□□□ -0.06
HCFC1-204ENST00000461098 MAPK4P31152 587 aa14.69□□□□□ -0.06
HCFC1-204ENST00000461098 ERVK-9P63128 1117 aa14.69□□□□□ -0.06
HCFC1-204ENST00000461098 ERVK-24P63145 666 aa14.69□□□□□ -0.06
HCFC1-204ENST00000461098 IRX3P78415 501 aaPredicted RBP14.69□□□□□ -0.06
HCFC1-204ENST00000461098 METTL16Q86W50 562 aaKnown RBP14.69□□□□□ -0.06
HCFC1-204ENST00000461098 FLRT1Q9NZU1 646 aa14.69□□□□□ -0.06
HCFC1-204ENST00000461098 RGS2P41220 211 aa14.68□□□□□ -0.06
HCFC1-204ENST00000461098 TFCP2Q12800 502 aa14.68□□□□□ -0.06
HCFC1-204ENST00000461098 SH3RF3Q8TEJ3 882 aaPredicted RBP14.68□□□□□ -0.06
HCFC1-204ENST00000461098 SENP6Q9GZR1 1112 aaPredicted RBP14.68□□□□□ -0.06
HCFC1-204ENST00000461098 PI4KBQ9UBF8 816 aa14.68□□□□□ -0.06
HCFC1-204ENST00000461098 CDK5RAP2Q96SN8 1893 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 C19orf81C9J6K1 198 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 CNMDO75829 334 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 IGHA2P01877 340 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 LDHCP07864 332 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 ASNSP08243 561 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 PLEKHH3Q7Z736 793 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 TEX11Q8IYF3 940 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 SPATA5Q8NB90 893 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 CDX2Q99626 313 aaPredicted RBP14.67□□□□□ -0.06
HCFC1-204ENST00000461098 APBA2Q99767 749 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 TMOD4Q9NZQ9 345 aa14.67□□□□□ -0.06
HCFC1-204ENST00000461098 USP17L10C9JJH3 530 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 GSTO1P78417 241 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 PDE3AQ14432 1141 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 MVPQ14764 893 aaKnown RBP14.66□□□□□ -0.06
HCFC1-204ENST00000461098 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 FAM9BQ8IZU0 186 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 FOCADQ5VW36 1801 aa14.66□□□□□ -0.06
HCFC1-204ENST00000461098 RLFQ13129 1914 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 GDF11O95390 407 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
HCFC1-204ENST00000461098 MCAMP43121 646 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 MAP2K5Q13163 448 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 SHHQ15465 462 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 MEIS3Q99687 375 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 PAGR1Q9BTK6 254 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 DHX36Q9H2U1 1008 aaKnown RBP14.65□□□□□ -0.06
HCFC1-204ENST00000461098 SEMA6BQ9H3T3 888 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 AKAP2Q9Y2D5 859 aa14.65□□□□□ -0.06
HCFC1-204ENST00000461098 ATN1P54259 1190 aaPredicted RBP14.64□□□□□ -0.07
HCFC1-204ENST00000461098 SLFN5Q08AF3 891 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 C9orf50Q5SZB4 431 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 TRPV1Q8NER1 839 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 LPAR1Q92633 364 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 EDC3Q96F86 508 aaKnown RBP14.64□□□□□ -0.07
HCFC1-204ENST00000461098 TTYH1Q9H313 450 aaPredicted RBP14.64□□□□□ -0.07
HCFC1-204ENST00000461098 PRDM6Q9NQX0 595 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 RAI14Q9P0K7 980 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
HCFC1-204ENST00000461098 ZBTB21Q9ULJ3 1066 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 FLT1P17948 1338 aa14.64□□□□□ -0.07
HCFC1-204ENST00000461098 E9PSI1 815 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 PPP4CP60510 307 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 MTX1Q13505 466 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 FOXP4Q8IVH2 680 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 MAPKAPK5Q8IW41 473 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 MAFAQ8NHW3 353 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 NPLOC4Q8TAT6 608 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 GTF3C2Q8WUA4 911 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 TGFBRAP1Q8WUH2 860 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 NEUROD6Q96NK8 337 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 LBHD1Q9BQE6 289 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 GINM1Q9NU53 330 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 AATFQ9NY61 560 aaKnown RBP eCLIP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 PALD1Q9ULE6 856 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
HCFC1-204ENST00000461098 RABGAP1Q9Y3P9 1069 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 TTC28Q96AY4 2481 aa14.63□□□□□ -0.07
HCFC1-204ENST00000461098 DNM1LO00429 736 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 HOXC6P09630 235 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 PTPREP23469 700 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 RTP1P59025 263 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 USP17L2Q6R6M4 530 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 C12orf42Q96LP6 360 aa14.62□□□□□ -0.07
HCFC1-204ENST00000461098 SLC15A5A6NIM6 579 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 SRGAP3O43295 1099 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 CYP2C19P33261 490 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 GRB14Q14449 540 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 MFSD14CQ5VZR4 134 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 CCAR1Q8IX12 1150 aaKnown RBP14.61□□□□□ -0.07
HCFC1-204ENST00000461098 MYLIPQ8WY64 445 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 BTBD7Q9P203 1132 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 LRP2BPQ9P2M1 347 aa14.61□□□□□ -0.07
HCFC1-204ENST00000461098 MYO5AQ9Y4I1 1855 aaKnown RBP14.61□□□□□ -0.07
HCFC1-204ENST00000461098 ANP32CO43423 234 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 MSCO60682 206 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 CYBAP13498 195 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 GJC2Q5T442 439 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-204ENST00000461098 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
HCFC1-204ENST00000461098 SLC39A5Q6ZMH5 540 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms