RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 SSC5DA1L4H1 1573 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 LOC102724428A0A0B4J2F2 783 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 LOC100996750A0A140TA64 210 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 USP17L3A6NCW0 530 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 USP17L4A6NCW7 530 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 M0R2N6 131 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 EML1O00423 815 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 KHNYNO15037 678 aaKnown RBP7.43□□□□□ -1.22
CDKN3-205ENST00000458126 EFSO43281 561 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 HOXB4P17483 251 aaPredicted RBP7.43□□□□□ -1.22
CDKN3-205ENST00000458126 TXLNAP40222 546 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 SIK1P57059 783 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 USP17L2Q6R6M4 530 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 USP17L1Q7RTZ2 530 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 CD99L2Q8TCZ2 262 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 PRAM1Q96QH2 718 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 UCN2Q96RP3 112 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 HCN2Q9UL51 889 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 PTCH2Q9Y6C5 1203 aa7.43□□□□□ -1.22
CDKN3-205ENST00000458126 ZNF646O15015 1829 aaPredicted RBP7.43□□□□□ -1.22
CDKN3-205ENST00000458126 ALPK3Q96L96 1907 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 DCDC2BA2VCK2 349 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 AMPD1P23109 780 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 TM4SF1P30408 202 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 ITPK1Q13572 414 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 C7orf43Q8WVR3 580 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 MARK1Q9P0L2 795 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 ANKRD50Q9ULJ7 1429 aa7.42□□□□□ -1.22
CDKN3-205ENST00000458126 TJP1Q07157 1748 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 GVINP1Q7Z2Y8 2422 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 SERTM1A2A2V5 107 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 PALM3A6NDB9 673 aaPredicted RBP7.41□□□□□ -1.22
CDKN3-205ENST00000458126 NEURL1BA8MQ27 555 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 GNB5O14775 395 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 ITGB2P05107 769 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 CD33P20138 364 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 CLDN10P78369 228 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 CAP1Q01518 475 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 ZNF468Q5VIY5 522 aaPredicted RBP7.41□□□□□ -1.22
CDKN3-205ENST00000458126 C1orf53Q5VUE5 145 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 ATRNL1Q5VV63 1379 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 NRXN2Q9P2S2 1712 aa7.41□□□□□ -1.22
CDKN3-205ENST00000458126 HIRAP54198 1017 aaPredicted RBP7.4□□□□□ -1.22
CDKN3-205ENST00000458126 PSMA6P60900 246 aaKnown RBP7.4□□□□□ -1.22
CDKN3-205ENST00000458126 DLK2Q6UY11 383 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 USP48Q86UV5 1035 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 SIX5Q8N196 739 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 OGFOD1Q8N543 542 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 SH3TC2Q8TF17 1288 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 GLMNQ92990 594 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 ZNF277Q9NRM2 450 aaPredicted RBP7.4□□□□□ -1.22
CDKN3-205ENST00000458126 PRR12Q9ULL5 1215 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 ZNF232Q9UNY5 417 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 DAPK1P53355 1430 aa7.4□□□□□ -1.22
CDKN3-205ENST00000458126 CACNA1HO95180 2353 aa7.4□□□□□ -1.23
CDKN3-205ENST00000458126 KRBA1A5PL33 1030 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 GJB1P08034 283 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 COL8A1P27658 744 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 DGKGP49619 791 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 FKBP4Q02790 459 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDKN3-205ENST00000458126 FCHSD1Q86WN1 690 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 C7orf61Q8IZ16 206 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 TRPM4Q8TD43 1214 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.23
CDKN3-205ENST00000458126 HNRNPABQ99729 332 aaKnown RBP7.39□□□□□ -1.23
CDKN3-205ENST00000458126 GPRC5DQ9NZD1 345 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 CHMP3Q9Y3E7 222 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 HELZ2Q9BYK8 2649 aaKnown RBP7.39□□□□□ -1.23
CDKN3-205ENST00000458126 MYO18BQ8IUG5 2567 aa7.39□□□□□ -1.23
CDKN3-205ENST00000458126 FAM205AQ6ZU69 1335 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 PROCP04070 461 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 SYN1P17600 705 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 EIF6P56537 245 aaKnown RBP7.38□□□□□ -1.23
CDKN3-205ENST00000458126 SREBF2Q12772 1141 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 AKNAD1Q5T1N1 836 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 LRRC69Q6ZNQ3 347 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 CHSY3Q70JA7 882 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 DGLUCYQ7Z3D6 616 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
CDKN3-205ENST00000458126 CXXC1Q9P0U4 656 aaPredicted RBP7.38□□□□□ -1.23
CDKN3-205ENST00000458126 RBM19Q9Y4C8 960 aaKnown RBP7.38□□□□□ -1.23
CDKN3-205ENST00000458126 GTF3C3Q9Y5Q9 886 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 AFDNP55196 1824 aaKnown RBP7.38□□□□□ -1.23
CDKN3-205ENST00000458126 DOPEY1Q5JWR5 2465 aa7.38□□□□□ -1.23
CDKN3-205ENST00000458126 PIK3C2GO75747 1445 aa7.37□□□□□ -1.23
CDKN3-205ENST00000458126 VPS8Q8N3P4 1428 aa7.37□□□□□ -1.23
CDKN3-205ENST00000458126 ADGRF5Q8IZF2 1346 aa7.37□□□□□ -1.23
CDKN3-205ENST00000458126 USP42Q9H9J4 1324 aaKnown RBP7.37□□□□□ -1.23
CDKN3-205ENST00000458126 DKK1O94907 266 aa7.37□□□□□ -1.23
CDKN3-205ENST00000458126 EGFRP00533 1210 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms