RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 APBA2Q99767 749 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 PAGR1Q9BTK6 254 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 SENP6Q9GZR1 1112 aaPredicted RBP17.36■□□□□ 0.37
LINC01088-201ENST00000437737 RAI14Q9P0K7 980 aa17.36■□□□□ 0.37
LINC01088-201ENST00000437737 ASNSP08243 561 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 ERVK-9P63128 1117 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 ERVK-24P63145 666 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 PLEKHH3Q7Z736 793 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
LINC01088-201ENST00000437737 NOL10Q9BSC4 688 aaKnown RBP17.35■□□□□ 0.37
LINC01088-201ENST00000437737 TRIM34Q9BYJ4 488 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 PORCNQ9H237 461 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 COPRSQ9NQ92 184 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 PI4KBQ9UBF8 816 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 AKAP2Q9Y2D5 859 aa17.35■□□□□ 0.37
LINC01088-201ENST00000437737 C19orf81C9J6K1 198 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 USP17L10C9JJH3 530 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 Q3C1V9 767 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
LINC01088-201ENST00000437737 USP6NLQ92738 828 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 RBPJLQ9UBG7 517 aa17.34■□□□□ 0.37
LINC01088-201ENST00000437737 LTBP2Q14767 1821 aa17.33■□□□□ 0.37
LINC01088-201ENST00000437737 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
LINC01088-201ENST00000437737 TFCP2Q12800 502 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 MORN1Q5T089 497 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 GORABQ5T7V8 394 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 DHX36Q9H2U1 1008 aaKnown RBP17.33■□□□□ 0.36
LINC01088-201ENST00000437737 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 CDK5RAP2Q96SN8 1893 aa17.33■□□□□ 0.36
LINC01088-201ENST00000437737 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
LINC01088-201ENST00000437737 GDF11O95390 407 aa17.32■□□□□ 0.36
LINC01088-201ENST00000437737 MAP2K5Q13163 448 aa17.32■□□□□ 0.36
LINC01088-201ENST00000437737 MFSD14CQ5VZR4 134 aa17.32■□□□□ 0.36
LINC01088-201ENST00000437737 CRACR2BQ8N4Y2 399 aaPredicted RBP17.32■□□□□ 0.36
LINC01088-201ENST00000437737 SH3RF3Q8TEJ3 882 aaPredicted RBP17.32■□□□□ 0.36
LINC01088-201ENST00000437737 GLRX3O76003 335 aaKnown RBP17.31■□□□□ 0.36
LINC01088-201ENST00000437737 CNGA1P29973 690 aa17.31■□□□□ 0.36
LINC01088-201ENST00000437737 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
LINC01088-201ENST00000437737 WDR78Q5VTH9 848 aa17.31■□□□□ 0.36
LINC01088-201ENST00000437737 MAFAQ8NHW3 353 aaPredicted RBP17.31■□□□□ 0.36
LINC01088-201ENST00000437737 EDC3Q96F86 508 aaKnown RBP17.31■□□□□ 0.36
LINC01088-201ENST00000437737 CDX2Q99626 313 aaPredicted RBP17.31■□□□□ 0.36
LINC01088-201ENST00000437737 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
LINC01088-201ENST00000437737 DDX20Q9UHI6 824 aaKnown RBP17.31■□□□□ 0.36
LINC01088-201ENST00000437737 FOCADQ5VW36 1801 aa17.31■□□□□ 0.36
LINC01088-201ENST00000437737 MSCO60682 206 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 CCNA1P78396 465 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 JAG1P78504 1218 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 SHROOM1Q2M3G4 852 aaPredicted RBP17.3■□□□□ 0.36
LINC01088-201ENST00000437737 MAPKAPK5Q8IW41 473 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 AATFQ9NY61 560 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC01088-201ENST00000437737 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
LINC01088-201ENST00000437737 E9PSI1 815 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 BAG3O95817 575 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 RTP1P59025 263 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 USP17L2Q6R6M4 530 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 TGFBRAP1Q8WUH2 860 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 LPAR1Q92633 364 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 DNAJC18Q9H819 358 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 GINM1Q9NU53 330 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 ATP11BQ9Y2G3 1177 aa17.29■□□□□ 0.36
LINC01088-201ENST00000437737 RLFQ13129 1914 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 DNM1LO00429 736 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 PLCG2P16885 1265 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 ATP2B2Q01814 1243 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
LINC01088-201ENST00000437737 FOXP4Q8IVH2 680 aaPredicted RBP17.28■□□□□ 0.36
LINC01088-201ENST00000437737 FEZ1Q99689 392 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 PRDM6Q9NQX0 595 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
LINC01088-201ENST00000437737 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 FLRT1Q9NZU1 646 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 RABGAP1Q9Y3P9 1069 aa17.28■□□□□ 0.36
LINC01088-201ENST00000437737 FLT1P17948 1338 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 HLA-DOAP06340 250 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 ARID4AP29374 1257 aaPredicted RBP17.27■□□□□ 0.36
LINC01088-201ENST00000437737 SHHQ15465 462 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 ZYXQ15942 572 aaKnown RBP17.27■□□□□ 0.36
LINC01088-201ENST00000437737 POTEEQ6S8J3 1075 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 MYLIPQ8WY64 445 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 MEIS3Q99687 375 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 SEMA6BQ9H3T3 888 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 IVNS1ABPQ9Y6Y0 642 aa17.27■□□□□ 0.36
LINC01088-201ENST00000437737 SLC15A5A6NIM6 579 aa17.26■□□□□ 0.35
LINC01088-201ENST00000437737 PTPREP23469 700 aa17.26■□□□□ 0.35
LINC01088-201ENST00000437737 MCAMP43121 646 aa17.26■□□□□ 0.35
LINC01088-201ENST00000437737 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
LINC01088-201ENST00000437737 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
LINC01088-201ENST00000437737 NOB1Q9ULX3 412 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms