RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 GNAI3P08754 354 aa27.23■■□□□ 1.95
PTPRA-207ENST00000431048 CACNB2Q08289 660 aaPredicted RBP27.23■■□□□ 1.95
PTPRA-207ENST00000431048 LHX8Q68G74 356 aa27.23■■□□□ 1.95
PTPRA-207ENST00000431048 PI16Q6UXB8 463 aa27.23■■□□□ 1.95
PTPRA-207ENST00000431048 FOXP4Q8IVH2 680 aaPredicted RBP27.23■■□□□ 1.95
PTPRA-207ENST00000431048 GTF3C2Q8WUA4 911 aaPredicted RBP27.23■■□□□ 1.95
PTPRA-207ENST00000431048 ZKSCAN1P17029 563 aaPredicted RBP27.22■■□□□ 1.95
PTPRA-207ENST00000431048 PPP4CP60510 307 aa27.22■■□□□ 1.95
PTPRA-207ENST00000431048 PDE3AQ14432 1141 aa27.22■■□□□ 1.95
PTPRA-207ENST00000431048 GORABQ5T7V8 394 aa27.22■■□□□ 1.95
PTPRA-207ENST00000431048 SH3RF3Q8TEJ3 882 aaPredicted RBP27.22■■□□□ 1.95
PTPRA-207ENST00000431048 USP17L10C9JJH3 530 aa27.21■■□□□ 1.95
PTPRA-207ENST00000431048 PLCG2P16885 1265 aa27.21■■□□□ 1.95
PTPRA-207ENST00000431048 MORN1Q5T089 497 aa27.21■■□□□ 1.95
PTPRA-207ENST00000431048 CDCA7LQ96GN5 454 aa27.21■■□□□ 1.95
PTPRA-207ENST00000431048 NOL10Q9BSC4 688 aaKnown RBP27.21■■□□□ 1.95
PTPRA-207ENST00000431048 LRP2BPQ9P2M1 347 aa27.21■■□□□ 1.95
PTPRA-207ENST00000431048 BAG3O95817 575 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 UQCRFS1P1P0C7P4 283 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 RGS2P41220 211 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 ERVK-9P63128 1117 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 ERVK-24P63145 666 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 JAG1P78504 1218 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 Q3C1V9 767 aa27.2■■□□□ 1.94
PTPRA-207ENST00000431048 MCAMP43121 646 aa27.19■■□□□ 1.94
PTPRA-207ENST00000431048 FAM109BQ6ICB4 259 aaPredicted RBP27.19■■□□□ 1.94
PTPRA-207ENST00000431048 ARHGAP45Q92619 1136 aa27.19■■□□□ 1.94
PTPRA-207ENST00000431048 DNAJC18Q9H819 358 aa27.19■■□□□ 1.94
PTPRA-207ENST00000431048 PEX10O60683 326 aa27.18■■□□□ 1.94
PTPRA-207ENST00000431048 IGSF3O75054 1194 aa27.18■■□□□ 1.94
PTPRA-207ENST00000431048 LRRC26Q2I0M4 334 aa27.18■■□□□ 1.94
PTPRA-207ENST00000431048 GPR142Q7Z601 462 aa27.18■■□□□ 1.94
PTPRA-207ENST00000431048 PLEKHH3Q7Z736 793 aa27.18■■□□□ 1.94
PTPRA-207ENST00000431048 ZNF316A6NFI3 1004 aaPredicted RBP27.17■■□□□ 1.94
PTPRA-207ENST00000431048 CCND3P30281 292 aaPredicted RBP27.17■■□□□ 1.94
PTPRA-207ENST00000431048 CCAR1Q8IX12 1150 aaKnown RBP27.17■■□□□ 1.94
PTPRA-207ENST00000431048 PORCNQ9H237 461 aa27.17■■□□□ 1.94
PTPRA-207ENST00000431048 POTEB2H3BUK9 544 aa27.16■■□□□ 1.94
PTPRA-207ENST00000431048 CCL14Q16627 93 aa27.16■■□□□ 1.94
PTPRA-207ENST00000431048 NAA16Q6N069 864 aaPredicted RBP27.16■■□□□ 1.94
PTPRA-207ENST00000431048 POTEEQ6S8J3 1075 aa27.16■■□□□ 1.94
PTPRA-207ENST00000431048 APBA2Q99767 749 aa27.16■■□□□ 1.94
PTPRA-207ENST00000431048 EMILIN3Q9NT22 766 aa27.16■■□□□ 1.94
PTPRA-207ENST00000431048 AATFQ9NY61 560 aaKnown RBP eCLIP27.16■■□□□ 1.94
PTPRA-207ENST00000431048 USP17L2Q6R6M4 530 aa27.15■■□□□ 1.94
PTPRA-207ENST00000431048 TGFBRAP1Q8WUH2 860 aa27.15■■□□□ 1.94
PTPRA-207ENST00000431048 ZBTB21Q9ULJ3 1066 aa27.15■■□□□ 1.94
PTPRA-207ENST00000431048 SIPA1L1O43166 1804 aa27.15■■□□□ 1.94
PTPRA-207ENST00000431048 UNC80Q8N2C7 3258 aa27.14■■□□□ 1.94
PTPRA-207ENST00000431048 MAP2K5Q13163 448 aa27.14■■□□□ 1.94
PTPRA-207ENST00000431048 G3BP1Q13283 466 aaKnown RBP eCLIP27.14■■□□□ 1.94
PTPRA-207ENST00000431048 MAPKAPK5Q8IW41 473 aa27.14■■□□□ 1.94
PTPRA-207ENST00000431048 CRACR2BQ8N4Y2 399 aaPredicted RBP27.14■■□□□ 1.94
PTPRA-207ENST00000431048 TRIM34Q9BYJ4 488 aa27.14■■□□□ 1.94
PTPRA-207ENST00000431048 RABGAP1Q9Y3P9 1069 aa27.14■■□□□ 1.94
PTPRA-207ENST00000431048 FLT1P17948 1338 aa27.14■■□□□ 1.93
PTPRA-207ENST00000431048 EDC3Q96F86 508 aaKnown RBP27.13■■□□□ 1.93
PTPRA-207ENST00000431048 C12orf42Q96LP6 360 aa27.13■■□□□ 1.93
PTPRA-207ENST00000431048 GLRX3O76003 335 aaKnown RBP27.12■■□□□ 1.93
PTPRA-207ENST00000431048 GDF11O95390 407 aa27.12■■□□□ 1.93
PTPRA-207ENST00000431048 MDM2Q00987 491 aaPredicted RBP27.12■■□□□ 1.93
PTPRA-207ENST00000431048 SHROOM1Q2M3G4 852 aaPredicted RBP27.12■■□□□ 1.93
PTPRA-207ENST00000431048 PAGR1Q9BTK6 254 aa27.12■■□□□ 1.93
PTPRA-207ENST00000431048 GPR108Q9NPR9 543 aa27.12■■□□□ 1.93
PTPRA-207ENST00000431048 PALD1Q9ULE6 856 aa27.12■■□□□ 1.93
PTPRA-207ENST00000431048 RARSP54136 660 aaKnown RBP27.11■■□□□ 1.93
PTPRA-207ENST00000431048 CCNA1P78396 465 aa27.11■■□□□ 1.93
PTPRA-207ENST00000431048 ATF7IPQ6VMQ6 1270 aa27.11■■□□□ 1.93
PTPRA-207ENST00000431048 DNAH12Q6ZR08 3092 aa27.1■■□□□ 1.93
PTPRA-207ENST00000431048 GNAI2P04899 355 aa27.1■■□□□ 1.93
PTPRA-207ENST00000431048 MFSD14CQ5VZR4 134 aa27.1■■□□□ 1.93
PTPRA-207ENST00000431048 ADGRA1Q86SQ6 560 aa27.1■■□□□ 1.93
PTPRA-207ENST00000431048 COL25A1Q9BXS0 654 aaPredicted RBP27.1■■□□□ 1.93
PTPRA-207ENST00000431048 SLC15A5A6NIM6 579 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L15C9J2P7 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L13C9JLJ4 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L11C9JVI0 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L18D6R9N7 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L22D6RA61 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L17D6RBQ6 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L19D6RCP7 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L20D6RJB6 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 MSCO60682 206 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 CNMDO75829 334 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 HLA-DOAP06340 250 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 HOXC6P09630 235 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 USP17L24Q0WX57 530 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 ZNF512BQ96KM6 892 aaPredicted RBP27.09■■□□□ 1.93
PTPRA-207ENST00000431048 LBHD1Q9BQE6 289 aaPredicted RBP27.09■■□□□ 1.93
PTPRA-207ENST00000431048 SNRKQ9NRH2 765 aa27.09■■□□□ 1.93
PTPRA-207ENST00000431048 CCDC158Q5M9N0 1113 aa27.08■■□□□ 1.93
PTPRA-207ENST00000431048 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.08■■□□□ 1.93
PTPRA-207ENST00000431048 GUCD1Q96NT3 240 aa27.08■■□□□ 1.93
PTPRA-207ENST00000431048 SENP6Q9GZR1 1112 aaPredicted RBP27.08■■□□□ 1.93
PTPRA-207ENST00000431048 CWC22Q9HCG8 908 aaKnown RBP27.08■■□□□ 1.93
PTPRA-207ENST00000431048 LAMA2P24043 3122 aaKnown RBP27.08■■□□□ 1.93
PTPRA-207ENST00000431048 PNMA6EA0A0J9YXQ4 647 aa27.07■■□□□ 1.92
PTPRA-207ENST00000431048 CYP2E1P05181 493 aaPredicted RBP27.07■■□□□ 1.92
PTPRA-207ENST00000431048 PTPREP23469 700 aa27.07■■□□□ 1.92
PTPRA-207ENST00000431048 TTC39AQ5SRH9 613 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms