RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 MYD88Q99836 296 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RBSNQ9H1K0 784 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RRAGCQ9HB90 399 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 COPRSQ9NQ92 184 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 TLR7Q9NYK1 1049 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 C9orf78Q9NZ63 289 aaPredicted RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 TMEM63CQ9P1W3 806 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 MKRN1Q9UHC7 482 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 ZMIZ1Q9ULJ6 1067 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 NSFL1CQ9UNZ2 370 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 SPG7Q9UQ90 795 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 DYRK1BQ9Y463 629 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 USP16Q9Y5T5 823 aa3.28□□□□□ -1.88
LINC00407-201ENST00000426509 DDX49Q9Y6V7 483 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 AFDNP55196 1824 aaKnown RBP3.28□□□□□ -1.88
LINC00407-201ENST00000426509 RFX7Q2KHR2 1363 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CCDC171Q6TFL3 1326 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 A0A0D9SFI3 127 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CDC14CA4D256 554 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CCDC85CA6NKD9 419 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L15C9J2P7 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L10C9JJH3 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L13C9JLJ4 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L12C9JPN9 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L11C9JVI0 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L21D6R901 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L18D6R9N7 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L22D6RA61 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L17D6RBQ6 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L19D6RCP7 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L20D6RJB6 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 SLC27A2O14975 620 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 INHAP05111 366 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 IFIT2P09913 472 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 SLURP2P0DP57 97 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CSB-PGBD3P0DP91 1061 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 MYL6BP14649 208 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 PIP4K2AP48426 406 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 LBX1P52954 281 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 AK2P54819 239 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 PTPN12Q05209 780 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 USP17L24Q0WX57 530 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 FSTL1Q12841 308 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 G3BP1Q13283 466 aaKnown RBP eCLIP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 COL9A3Q14050 684 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 UBAP2LQ14157 1087 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 ADCK5Q3MIX3 580 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 C4orf17Q53FE4 359 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 ZNF385CQ66K41 422 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CREB3L3Q68CJ9 461 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 PRPF40BQ6NWY9 871 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 ZNF589Q86UQ0 364 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 TRIM22Q8IYM9 498 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 KLHDC4Q8TBB5 520 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 RUFY2Q8WXA3 655 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 JARID2Q92833 1246 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 MAP4K1Q92918 833 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 EVI5LQ96CN4 794 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 GPATCH3Q96I76 525 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 FAM227BQ96M60 508 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 FMNL2Q96PY5 1086 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 TM6SF1Q9BZW5 370 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CCDC8Q9H0W5 538 aaPredicted RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 BOLA2Q9H3K6 86 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 PRDM10Q9NQV6 1147 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 DIAPH3Q9NSV4 1193 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 TFCP2L1Q9NZI6 479 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 DBNLQ9UJU6 430 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 HDAC5Q9UQL6 1122 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 CD2APQ9Y5K6 639 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 RBM8AQ9Y5S9 174 aaKnown RBP3.27□□□□□ -1.89
LINC00407-201ENST00000426509 TAF6LQ9Y6J9 622 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 COL24A1Q17RW2 1714 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 ZNF609O15014 1411 aa3.27□□□□□ -1.89
LINC00407-201ENST00000426509 SBF2Q86WG5 1849 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 WDR17Q8IZU2 1322 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PCDH11XQ9BZA7 1347 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PCDH11YQ9BZA8 1340 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 WDR33Q9C0J8 1336 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 CARNS1A5YM72 827 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 H7C1W4 665 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GPR25O00155 361 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 HIP1O00291 1037 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GADD45BO75293 160 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ARHGEF15O94989 841 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 MBD3O95983 291 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 F11P03951 625 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ZSCAN22P10073 491 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 HSPA8P11142 646 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 ATP5JP18859 108 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 CASTP20810 708 aaKnown RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 RASA1P20936 1047 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 SYT1P21579 422 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 PHKA2P46019 1235 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 NASPP49321 788 aaPredicted RBP3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GSK3AP49840 483 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GDF10P55107 478 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 CABP4P57796 275 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 GTF2IP78347 998 aa3.26□□□□□ -1.89
LINC00407-201ENST00000426509 FOXO4P98177 505 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms