RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 SELENOOQ9BVL4 669 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 MAPK8IP1Q9UQF2 711 aa12.77□□□□□ -0.36
SEC61A1-202ENST00000424880 NR1I3Q14994 352 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 E2F5Q15329 346 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 VPS16Q9H269 839 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 ACBD3Q9H3P7 528 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 SENP2Q9HC62 589 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 C2orf54Q08AI8 447 aa12.77□□□□□ -0.37
SEC61A1-202ENST00000424880 GOLGA6BA6NDN3 693 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 BACH1O14867 736 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 GCP02774 474 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 MICU3Q86XE3 530 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 COG1Q8WTW3 980 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 STAG1Q8WVM7 1258 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 ARL8AQ96BM9 186 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 NUP88Q99567 741 aaPredicted RBP12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 ALG1Q9BT22 464 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 ZC3H4Q9UPT8 1303 aaKnown RBP12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 GYPCP04921 128 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 FKBP4Q02790 459 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 SND1Q7KZF4 910 aaKnown RBP eCLIP12.76□□□□□ -0.373e-10■■■□□ 17.5
SEC61A1-202ENST00000424880 RIC3Q7Z5B4 369 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 OTUD6BQ8N6M0 293 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 INCENPQ9NQS7 918 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 HPS5Q9UPZ3 1129 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 DUSP10Q9Y6W6 482 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 PXDNLA1KZ92 1463 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 LTN1O94822 1766 aa12.76□□□□□ -0.37
SEC61A1-202ENST00000424880 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 PPP1R12AO14974 1030 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 PRC1O43663 620 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 ZNF18P17022 549 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 SEC24CP53992 1094 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 APBA1Q02410 837 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 NAIF1Q69YI7 327 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 PRPF38AQ8NAV1 312 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 TMEM94Q12767 1356 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 USP8P40818 1118 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 PIP4K2BP78356 416 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 GUCY1A3Q02108 690 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 POSTNQ15063 836 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 KRT28Q7Z3Y7 464 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 CTCFLQ8NI51 663 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 ZKSCAN4Q969J2 545 aaPredicted RBP12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 GBP3Q9H0R5 595 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 KRT14P02533 472 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 WASHC4Q2M389 1173 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 KRT40Q6A162 431 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 KSR2Q6VAB6 950 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 ANKRD18AQ8IVF6 992 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 HPSEQ9Y251 543 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
SEC61A1-202ENST00000424880 M0R2C6 588 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 PDHBP11177 359 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 ARHGAP25P42331 645 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 SETQ01105 290 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 GRIN2DO15399 1336 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 HMGB1P09429 215 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 CDC25CP30307 473 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 CXCR5P32302 372 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 RDXP35241 583 aaKnown RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 USP14P54578 494 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 TTC39AQ5SRH9 613 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 ZNF274Q96GC6 653 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 CABS1Q96KC9 395 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 MYD88Q99836 296 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 KCNJ14Q9UNX9 436 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 DCCP43146 1447 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 ABCC6O95255 1503 aa12.74□□□□□ -0.37
SEC61A1-202ENST00000424880 MFAP3LO75121 409 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 ZPR1O75312 459 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 DNA2P51530 1060 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 PTPAQ15257 358 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 C11orf91Q3C1V1 193 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 NUTM2AQ8IVF1 878 aaPredicted RBP12.73□□□□□ -0.37
SEC61A1-202ENST00000424880 AIDAQ96BJ3 306 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms