RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 TREML2Q5T2D2 321 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 TRMT2AQ8IZ69 625 aaKnown RBP10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 SPATA5Q8NB90 893 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 U2AF1L4Q8WU68 220 aaKnown RBP10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 SNRKQ9NRH2 765 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 LRP2BPQ9P2M1 347 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 TNNQ9UQP3 1299 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 ATRNL1Q5VV63 1379 aa10.11□□□□□ -0.79
AC004009.1-201ENST00000412413 ZSWIM8A7E2V4 1837 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 GPR75-ASB3A0A0A6YYF3 556 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 GNAI2P04899 355 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 RHBDL3P58872 404 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 ZNF384Q8TF68 577 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 COA7Q96BR5 231 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 DEFB118Q96PH6 123 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 NOL10Q9BSC4 688 aaKnown RBP10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 AGTPBP1Q9UPW5 1226 aa10.1□□□□□ -0.79
AC004009.1-201ENST00000412413 PNMA6EA0A0J9YXQ4 647 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 IPO8O15397 1037 aaKnown RBP10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 BCAR3O75815 825 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 HMGCS2P54868 508 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 SH3RF3Q8TEJ3 882 aaPredicted RBP10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 NSUN4Q96CB9 384 aaKnown RBP10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 TRIM34Q9BYJ4 488 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 NR2E3Q9Y5X4 410 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 CEP290O15078 2479 aa10.09□□□□□ -0.79
AC004009.1-201ENST00000412413 EVI5O60447 810 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 SGPL1O95470 568 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 RRP1BQ14684 758 aaKnown RBP10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 TTC39AQ5SRH9 613 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 GPR153Q6NV75 609 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 ZNF280CQ8ND82 737 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 KHSRPQ92945 711 aaKnown RBP eCLIP10.08□□□□□ -0.89e-8■■■■□ 24.3
AC004009.1-201ENST00000412413 OSBPL5Q9H0X9 879 aaPredicted RBP10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 AATFQ9NY61 560 aaKnown RBP eCLIP10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 SAP30BPQ9UHR5 308 aaKnown RBP10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 SLC45A1Q9Y2W3 748 aa10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
AC004009.1-201ENST00000412413 PDS5AQ29RF7 1337 aaKnown RBP10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 TRIOBPQ9H2D6 2365 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 USP17L5A8MUK1 530 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 ST18O60284 1047 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 TRIM27P14373 513 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 CAP2P40123 477 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 MCAMP43121 646 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 IRX3P78415 501 aaPredicted RBP10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 MAP3K10Q02779 954 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 MTX1Q13505 466 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 TGFBRAP1Q8WUH2 860 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 ARHGAP45Q92619 1136 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 C1orf115Q9H7X2 142 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 TMOD4Q9NZQ9 345 aa10.07□□□□□ -0.8
AC004009.1-201ENST00000412413 ZBTB7BO15156 539 aaPredicted RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 PEX10O60683 326 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 GDF11O95390 407 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 BAG3O95817 575 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 NUDT7P0C024 238 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 ARID4AP29374 1257 aaPredicted RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 PABPC4Q13310 644 aaKnown RBP eCLIP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 IRF5Q13568 498 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 MTMR2Q13614 643 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 FAM110CQ1W6H9 321 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 CCDC158Q5M9N0 1113 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 ATF7IPQ6VMQ6 1270 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 PROCA1Q8NCQ7 364 aaPredicted RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 DIS3LQ8TF46 1054 aaKnown RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 PAWRQ96IZ0 340 aaKnown RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 DBNDD2Q9BQY9 259 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 BCL11AQ9H165 835 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 AS3MTQ9HBK9 375 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 MKI67P46013 3256 aaKnown RBP10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 LAMB1P07942 1786 aa10.06□□□□□ -0.8
AC004009.1-201ENST00000412413 SURF6O75683 361 aaKnown RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 CYP2B6P20813 491 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 GCLCP48506 637 aaPredicted RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 TRIM32Q13049 653 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 TNNI3KQ59H18 835 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 UBE2Q1Q7Z7E8 422 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 PI4KBQ9UBF8 816 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 STAP2Q9UGK3 403 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
AC004009.1-201ENST00000412413 FPGT-TNNI3KV9GXZ4 949 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms