RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ESCO1Q5FWF5 840 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 MUM1L1Q5H9M0 696 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 SMYD4Q8IYR2 804 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 METTL22Q9BUU2 404 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 PNMA3Q9UL41 463 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 CCDC175P0C221 793 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 ZMYM1Q5SVZ6 1142 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 PPFIBP1Q86W92 1011 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 GPATCH11Q8N954 259 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 EXOC4Q96A65 974 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 SERTAD1Q9UHV2 236 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 ZNF213O14771 459 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 TRDNQ13061 729 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 TRIM29Q14134 588 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 SART3Q15020 963 aaKnown RBP11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 NKX2-3Q8TAU0 364 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 KCNK17Q96T54 332 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 RAI14Q9P0K7 980 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
PTCHD4-202ENST00000398738 FAM208AQ9UK61 1670 aaKnown RBP11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 CCDC151A5D8V7 595 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 CUTAO60888 179 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 KCNA6P17658 529 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 CCT6AP40227 531 aaKnown RBP11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 KCNJ6P48051 423 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 ZC3H6P61129 1189 aaKnown RBP11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 VSNL1P62760 191 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 FKBP15Q5T1M5 1219 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 RAD9BQ6WBX8 426 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 HDXQ7Z353 690 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 JMYQ8N9B5 988 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 RIN2Q8WYP3 895 aaPredicted RBP11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 C19orf44Q9H6X5 657 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 HELLSQ9NRZ9 838 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 STX10O60499 249 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 AP1G2O75843 785 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 RBL2Q08999 1139 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 ZNF790Q6PG37 636 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 SLC35F6Q8N357 371 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 ANKZF1Q9H8Y5 726 aa11.25□□□□□ -0.61
PTCHD4-202ENST00000398738 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ATP8B1O43520 1251 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 CDC25AP30304 524 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ADORA1P30542 326 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 PPARDQ03181 441 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 USP49Q70CQ1 688 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 UBXN6Q9BZV1 441 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 STRCP1A6NGW2 1772 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 LTBP4Q8N2S1 1624 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 AKR1B15C9JRZ8 316 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ENC1O14682 589 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ANTXR2P58335 489 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 TTC39AQ5SRH9 613 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 BEND6Q5SZJ8 279 aaPredicted RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 NLRP2Q9NX02 1062 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 TUBE1Q9UJT0 475 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 BTBD18B2RXH4 712 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 B4E1Z4 1266 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 EIF3CLB5ME19 914 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ERLIN1O75477 346 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 EIF3JO75822 258 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 DHX8Q14562 1220 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 SLC9C2Q5TAH2 1124 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 NOA1Q8NC60 698 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 NCOA7Q8NI08 942 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ADAMTS19Q8TE59 1207 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 CAPZA3Q96KX2 299 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 EIF3CQ99613 913 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 HOOK1Q9UJC3 728 aaKnown RBP11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 TFR2Q9UP52 801 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 ITSN1Q15811 1721 aa11.24□□□□□ -0.61
PTCHD4-202ENST00000398738 GOLGA6L9A6NEM1 432 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms