RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 KCNH3Q9ULD8 1083 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 FOXN1O15353 648 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 NMT2O60551 498 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 AKAP17AQ02040 695 aaKnown RBP27.32■■□□□ 1.96
PABPN1-202ENST00000397276 KRI1Q8N9T8 703 aaKnown RBP27.32■■□□□ 1.96
PABPN1-202ENST00000397276 CNNM3Q8NE01 707 aa27.32■■□□□ 1.96
PABPN1-202ENST00000397276 ARHGEF1Q92888 912 aaKnown RBP27.32■■□□□ 1.96
PABPN1-202ENST00000397276 CUTAO60888 179 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 LMOD1P29536 600 aaPredicted RBP27.31■■□□□ 1.96
PABPN1-202ENST00000397276 IFNKQ9P0W0 207 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 RTCBQ9Y3I0 505 aaKnown RBP27.31■■□□□ 1.96
PABPN1-202ENST00000397276 TIAM2Q8IVF5 1701 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 BCORQ6W2J9 1755 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 PLEKHA8P1O95397 391 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 FAM47AQ5JRC9 791 aa27.31■■□□□ 1.96
PABPN1-202ENST00000397276 COL5A3P25940 1745 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-202ENST00000397276 FAM205CA6NFA0 338 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 SHISA4Q96DD7 197 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 TIGD1Q96MW7 591 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 BRIP1Q9BX63 1249 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 XPO4Q9C0E2 1151 aaKnown RBP27.3■■□□□ 1.96
PABPN1-202ENST00000397276 V9GY48 417 aaPredicted RBP27.3■■□□□ 1.96
PABPN1-202ENST00000397276 LAMB2P55268 1798 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 CYP2D6P10635 497 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 METTL16Q86W50 562 aaKnown RBP27.3■■□□□ 1.96
PABPN1-202ENST00000397276 IQCA1Q86XH1 822 aa27.3■■□□□ 1.96
PABPN1-202ENST00000397276 USP27XA6NNY8 438 aa27.29■■□□□ 1.96
PABPN1-202ENST00000397276 TPD52L1Q16890 204 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-202ENST00000397276 CATIPQ7Z7H3 387 aa27.29■■□□□ 1.96
PABPN1-202ENST00000397276 FOXP1Q9H334 677 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-202ENST00000397276 ECM29Q5VYK3 1845 aa27.29■■□□□ 1.96
PABPN1-202ENST00000397276 NID2Q14112 1375 aa27.29■■□□□ 1.96
PABPN1-202ENST00000397276 FOXP4Q8IVH2 680 aaPredicted RBP27.29■■□□□ 1.96
PABPN1-202ENST00000397276 PDILTQ8N807 584 aa27.29■■□□□ 1.96
PABPN1-202ENST00000397276 SMTNL1A8MU46 457 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 SKILP12757 684 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 NCAPHQ15003 741 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 MTA3Q9BTC8 594 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 A0A0U1RQG5 324 aaPredicted RBP27.28■■□□□ 1.96
PABPN1-202ENST00000397276 RILPL1Q5EBL4 403 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 KRBA2Q6ZNG9 492 aa27.28■■□□□ 1.96
PABPN1-202ENST00000397276 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.28■■□□□ 1.96
PABPN1-202ENST00000397276 V9GYY5 206 aaPredicted RBP27.28■■□□□ 1.96
PABPN1-202ENST00000397276 BAZ2AQ9UIF9 1905 aaKnown RBP27.28■■□□□ 1.96
PABPN1-202ENST00000397276 UBAP1LF5GYI3 381 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 ATP1A3P13637 1013 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 DCP1AQ9NPI6 582 aaPredicted RBP27.27■■□□□ 1.96
PABPN1-202ENST00000397276 CACNA1SQ13698 1873 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 BPIFA3Q9BQP9 254 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 TUBE1Q9UJT0 475 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 PCDHA5Q9Y5H7 936 aa27.27■■□□□ 1.96
PABPN1-202ENST00000397276 PKN1Q16512 942 aa27.26■■□□□ 1.96
PABPN1-202ENST00000397276 ANKIB1Q9P2G1 1089 aa27.26■■□□□ 1.96
PABPN1-202ENST00000397276 POLR2DO15514 142 aaKnown RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 EARS2Q5JPH6 523 aaKnown RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 RNF26Q9BY78 433 aaPredicted RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 ANKRD2Q9GZV1 360 aa27.26■■□□□ 1.95
PABPN1-202ENST00000397276 FBXO2Q9UK22 296 aaPredicted RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 USP21Q9UK80 565 aa27.26■■□□□ 1.95
PABPN1-202ENST00000397276 TM4SF1P30408 202 aa27.26■■□□□ 1.95
PABPN1-202ENST00000397276 TMC6Q7Z403 805 aa27.26■■□□□ 1.95
PABPN1-202ENST00000397276 CRNKL1Q9BZJ0 848 aaKnown RBP27.26■■□□□ 1.95
PABPN1-202ENST00000397276 KIF20AO95235 890 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 TPM4P67936 248 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 USP49Q70CQ1 688 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 TROAPQ12815 778 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 GRAMD1CQ8IYS0 662 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 CCDC112Q8NEF3 446 aa27.25■■□□□ 1.95
PABPN1-202ENST00000397276 GPR101Q96P66 508 aaPredicted RBP27.25■■□□□ 1.95
PABPN1-202ENST00000397276 TRMT1Q9NXH9 659 aaKnown RBP27.25■■□□□ 1.95
PABPN1-202ENST00000397276 RFC4P35249 363 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 HSP90AA4PQ58FG1 418 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 OGFRQ9NZT2 677 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 MYH2Q9UKX2 1941 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 FAM237AA0A1B0GTK4 181 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 SEMA3EO15041 775 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 PTPREP23469 700 aa27.24■■□□□ 1.95
PABPN1-202ENST00000397276 RCAN1P53805 252 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 PTPN21Q16825 1174 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 DZIP1Q86YF9 867 aaKnown RBP27.23■■□□□ 1.95
PABPN1-202ENST00000397276 SERTAD1Q9UHV2 236 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 FUT2Q10981 343 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 NOM1Q5C9Z4 860 aaKnown RBP27.23■■□□□ 1.95
PABPN1-202ENST00000397276 FEZ1Q99689 392 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 PODXL2Q9NZ53 605 aa27.23■■□□□ 1.95
PABPN1-202ENST00000397276 USP17L8P0C7I0 530 aa27.22■■□□□ 1.95
PABPN1-202ENST00000397276 XBP1P17861 261 aa27.22■■□□□ 1.95
PABPN1-202ENST00000397276 MCM9Q9NXL9 1143 aa27.22■■□□□ 1.95
PABPN1-202ENST00000397276 CCZ1BP86790 482 aa27.22■■□□□ 1.95
PABPN1-202ENST00000397276 CCZ1P86791 482 aaPredicted RBP27.22■■□□□ 1.95
PABPN1-202ENST00000397276 CSRNP2Q9H175 543 aa27.22■■□□□ 1.95
PABPN1-202ENST00000397276 PRR29P0C7W0 189 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 FANCCQ00597 558 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 NFIXQ14938 502 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 HSD3B7Q9H2F3 369 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 TSPY2A6NKD2 308 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 CEP135Q66GS9 1140 aa27.21■■□□□ 1.95
PABPN1-202ENST00000397276 BMP6P22004 513 aa27.2■■□□□ 1.95
PABPN1-202ENST00000397276 OLFM4Q6UX06 510 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 674.5 ms