RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 C7P10643 843 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 CAP2P40123 477 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 ZAP70P43403 619 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 SPP2Q13103 211 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 ADGRA1Q86SQ6 560 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 TGFBRAP1Q8WUH2 860 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
CNIH1-202ENST00000395573 DHX36Q9H2U1 1008 aaKnown RBP13.5□□□□□ -0.25
CNIH1-202ENST00000395573 TLR7Q9NYK1 1049 aaKnown RBP13.5□□□□□ -0.25
CNIH1-202ENST00000395573 PI4KBQ9UBF8 816 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
CNIH1-202ENST00000395573 GABRQQ9UN88 632 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
CNIH1-202ENST00000395573 TRIOBPQ9H2D6 2365 aa13.5□□□□□ -0.25
CNIH1-202ENST00000395573 DNAH12Q6ZR08 3092 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 ZNFX1Q9P2E3 1918 aaKnown RBP13.49□□□□□ -0.25
CNIH1-202ENST00000395573 FLT1P17948 1338 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 ZBED9Q6R2W3 1325 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 TNPO2O14787 897 aaKnown RBP13.49□□□□□ -0.25
CNIH1-202ENST00000395573 CCL5P13501 91 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 HMGCS2P54868 508 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 PPP4CP60510 307 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 UBXN2AP68543 259 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
CNIH1-202ENST00000395573 MAPKAPK5Q8IW41 473 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 ANKRD13CQ8N6S4 541 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 SLAIN1Q8ND83 568 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 ZNF512BQ96KM6 892 aaPredicted RBP13.49□□□□□ -0.25
CNIH1-202ENST00000395573 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
CNIH1-202ENST00000395573 PIH1D3Q9NQM4 214 aaKnown RBP13.49□□□□□ -0.25
CNIH1-202ENST00000395573 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
CNIH1-202ENST00000395573 ADCY3O60266 1144 aa13.48□□□□□ -0.25
CNIH1-202ENST00000395573 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.251e-6■■■■□ 21
CNIH1-202ENST00000395573 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
CNIH1-202ENST00000395573 CRACR2BQ8N4Y2 399 aaPredicted RBP13.48□□□□□ -0.25
CNIH1-202ENST00000395573 EAF2Q96CJ1 260 aaPredicted RBP13.48□□□□□ -0.25
CNIH1-202ENST00000395573 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
CNIH1-202ENST00000395573 RNF208Q9H0X6 261 aa13.48□□□□□ -0.25
CNIH1-202ENST00000395573 RANBP2P49792 3224 aaKnown RBP13.47□□□□□ -0.25
CNIH1-202ENST00000395573 IGSF3O75054 1194 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 IDH1O75874 414 aaKnown RBP13.47□□□□□ -0.25
CNIH1-202ENST00000395573 CYP7A1P22680 504 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 FLT3LGP49771 235 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 FAM110CQ1W6H9 321 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 HABP4Q5JVS0 413 aaKnown RBP13.47□□□□□ -0.25
CNIH1-202ENST00000395573 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 NKX2-3Q8TAU0 364 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 PANK1Q8TE04 598 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 COA7Q96BR5 231 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
CNIH1-202ENST00000395573 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 PALD1Q9ULE6 856 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
CNIH1-202ENST00000395573 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
CNIH1-202ENST00000395573 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 GJB1P08034 283 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 ASNSP08243 561 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 ELNP15502 786 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 GJA8P48165 433 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 GCLCP48506 637 aaPredicted RBP13.46□□□□□ -0.25
CNIH1-202ENST00000395573 DYNLL1P63167 89 aaKnown RBP13.46□□□□□ -0.25
CNIH1-202ENST00000395573 MTMR2Q13614 643 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
CNIH1-202ENST00000395573 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
CNIH1-202ENST00000395573 GDF11O95390 407 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 INHAP05111 366 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 IRF5Q13568 498 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 SH3D19Q5HYK7 790 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 AACSQ86V21 672 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 METTL16Q86W50 562 aaKnown RBP13.45□□□□□ -0.26
CNIH1-202ENST00000395573 FOXP4Q8IVH2 680 aaPredicted RBP13.45□□□□□ -0.26
CNIH1-202ENST00000395573 MAGEB6Q8N7X4 407 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 MIGA1Q8NAN2 632 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 PXYLP1Q8TE99 480 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 WDR18Q9BV38 432 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 TMOD4Q9NZQ9 345 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 SZT2Q5T011 3432 aa13.45□□□□□ -0.26
CNIH1-202ENST00000395573 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
CNIH1-202ENST00000395573 MS4A1P11836 297 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 USP5P45974 858 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 BACE1P56817 501 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 IRX3P78415 501 aaPredicted RBP13.44□□□□□ -0.26
CNIH1-202ENST00000395573 JAG1P78504 1218 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
CNIH1-202ENST00000395573 CERS3Q8IU89 383 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 RLFQ13129 1914 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 MYH4Q9Y623 1939 aa13.44□□□□□ -0.26
CNIH1-202ENST00000395573 PLXNA1Q9UIW2 1896 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms