RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 DNTTIP2Q5QJE6 756 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 CLIC6Q96NY7 704 aa17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 RBM28Q9NW13 759 aaKnown RBP17.67■□□□□ 0.42
UBE2D3-207ENST00000394801 PRPF3O43395 683 aaKnown RBP17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 PTPREP23469 700 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 PRDX5P30044 214 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 CATIPQ7Z7H3 387 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 TXNRD3Q86VQ6 643 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 CCDC24Q8N4L8 307 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 UQCRHP07919 91 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 PKN1Q16512 942 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 TRAPPC3LQ5T215 181 aa17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 CACTINQ8WUQ7 758 aaKnown RBP17.66■□□□□ 0.42
UBE2D3-207ENST00000394801 AATFQ9NY61 560 aaKnown RBP eCLIP17.66■□□□□ 0.426e-12■■□□□ 12.2
UBE2D3-207ENST00000394801 MAST2Q6P0Q8 1798 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 NEMFO60524 1076 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 RFC4P35249 363 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 LRMPQ12912 555 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 SPTY2D1Q68D10 685 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 KCNH3Q9ULD8 1083 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 LEMD3Q9Y2U8 911 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 IKBKBO14920 756 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 DDAH1O94760 285 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 XBP1P17861 261 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 ZNF579Q8NAF0 562 aaKnown RBP17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
UBE2D3-207ENST00000394801 PRDM1O75626 825 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 NT5C2P49902 561 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 NR5A1Q13285 461 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 GRAPQ13588 217 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 NCAPHQ15003 741 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 GRAPLQ8TC17 118 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 SHISA4Q96DD7 197 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 MYH6P13533 1939 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 KIAA1551Q9HCM1 1747 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 TNRC6CQ9HCJ0 1690 aaKnown RBP17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 SMTNL1A8MU46 457 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 DYNC1I1O14576 645 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 CHAF1AQ13111 956 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 LONRF3Q496Y0 759 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 KRBA2Q6ZNG9 492 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 LRRC8AQ8IWT6 810 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 MYRIPQ8NFW9 859 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 PHF20Q9BVI0 1012 aa17.64■□□□□ 0.41
UBE2D3-207ENST00000394801 SBF2Q86WG5 1849 aa17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 NFIXQ14938 502 aa17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 MTERF4Q7Z6M4 381 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 OXER1Q8TDS5 423 aa17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 GJD4Q96KN9 370 aaPredicted RBP17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 CEP131Q9UPN4 1083 aa17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 LAMB1P07942 1786 aa17.63■□□□□ 0.41
UBE2D3-207ENST00000394801 BIN1O00499 593 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 C15orf52Q6ZUT6 534 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 METTL16Q86W50 562 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 FBXW7Q969H0 707 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 MKRN1Q9UHC7 482 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 ADRA2BP18089 450 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 MDM2Q00987 491 aaPredicted RBP17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 TMTC3Q6ZXV5 915 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
UBE2D3-207ENST00000394801 RBM10P98175 930 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 FAM196AQ6ZSG2 479 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 FOXP4Q8IVH2 680 aaPredicted RBP17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 CABP5Q9NP86 173 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 PLEKHA8P1O95397 391 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 GTF2F1P35269 517 aaKnown RBP eCLIP17.61■□□□□ 0.417e-7■■■□□ 15.7
UBE2D3-207ENST00000394801 TPM4P67936 248 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 EVX2Q03828 476 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 PDE4BQ07343 736 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 PNOCQ13519 176 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 NOL10Q9BSC4 688 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 OSBPL5Q9H0X9 879 aaPredicted RBP17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 FAM13BQ9NYF5 915 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 IMPACTQ9P2X3 320 aa17.61■□□□□ 0.41
UBE2D3-207ENST00000394801 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 CNBD1Q8NA66 436 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 XDHP47989 1333 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 NPHP1O15259 732 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 KRT2P35908 639 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 GRIN1Q05586 938 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 ANKIB1Q9P2G1 1089 aa17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
UBE2D3-207ENST00000394801 GSDMDP57764 484 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
UBE2D3-207ENST00000394801 HSD3B7Q9H2F3 369 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms