RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 G3V3G9 751 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 SCRN1Q12765 414 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 TRDNQ13061 729 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 DCAF8Q5TAQ9 597 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 RAB11FIP4Q86YS3 637 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 ZSWIM5Q9P217 1185 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 LCMT1Q9UIC8 334 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 MROH7-TTC4A0A0A0MT08 1334 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 PPFIA3O75145 1194 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 KDM4AO75164 1064 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 ADCY5O95622 1261 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 GJB2P29033 226 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 RRP12Q5JTH9 1297 aaKnown RBP21.9■■□□□ 1.1
CCDC50-202ENST00000392456 DRC1Q96MC2 740 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 CRNKL1Q9BZJ0 848 aaKnown RBP21.9■■□□□ 1.1
CCDC50-202ENST00000392456 NCOA5Q9HCD5 579 aaKnown RBP21.9■■□□□ 1.1
CCDC50-202ENST00000392456 PPP1R1BQ9UD71 204 aaPredicted RBP21.9■■□□□ 1.1
CCDC50-202ENST00000392456 USP25Q9UHP3 1055 aa21.9■■□□□ 1.1
CCDC50-202ENST00000392456 CCT2P78371 535 aaKnown RBP21.89■■□□□ 1.1
CCDC50-202ENST00000392456 TBC1D22AQ8WUA7 517 aa21.89■■□□□ 1.1
CCDC50-202ENST00000392456 KCNF1Q9H3M0 494 aa21.89■■□□□ 1.1
CCDC50-202ENST00000392456 MED4Q9NPJ6 270 aa21.89■■□□□ 1.1
CCDC50-202ENST00000392456 SMC3Q9UQE7 1217 aa21.89■■□□□ 1.1
CCDC50-202ENST00000392456 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.89■■□□□ 1.1
CCDC50-202ENST00000392456 BTDP43251 543 aa21.89■■□□□ 1.09
CCDC50-202ENST00000392456 MFSD6Q6ZSS7 791 aa21.89■■□□□ 1.09
CCDC50-202ENST00000392456 GTF3C6Q969F1 213 aa21.89■■□□□ 1.09
CCDC50-202ENST00000392456 MYH2Q9UKX2 1941 aa21.89■■□□□ 1.09
CCDC50-202ENST00000392456 JAK2O60674 1132 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 PDIA3P30101 505 aaKnown RBP21.88■■□□□ 1.09
CCDC50-202ENST00000392456 DNAJC21Q5F1R6 531 aaKnown RBP21.88■■□□□ 1.09
CCDC50-202ENST00000392456 TXLNBQ8N3L3 684 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 STAG1Q8WVM7 1258 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 MKRN1Q9UHC7 482 aaKnown RBP21.88■■□□□ 1.09
CCDC50-202ENST00000392456 PRDM1O75626 825 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 USP17L8P0C7I0 530 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 PPP4CP60510 307 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 GSTO1P78417 241 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 MAST2Q6P0Q8 1798 aa21.88■■□□□ 1.09
CCDC50-202ENST00000392456 CCDC189A1A4V9 331 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 ECE2O60344 883 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 MBD3O95983 291 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 ATP2B1P20020 1258 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 SCNN1DP51172 638 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 GSCP56915 257 aaPredicted RBP21.87■■□□□ 1.09
CCDC50-202ENST00000392456 SEMA3FQ13275 785 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 FBXL16Q8N461 479 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 FAM184AQ8NB25 1140 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 TGFBRAP1Q8WUH2 860 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 SGSM3Q96HU1 749 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 ZKSCAN3Q9BRR0 538 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 SUFUQ9UMX1 484 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 SCN9AQ15858 1988 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 GPR75-ASB3A0A0A6YYF3 556 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 PODNQ7Z5L7 613 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 IGDCC4Q8TDY8 1250 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 ANAPC4Q9UJX5 808 aa21.87■■□□□ 1.09
CCDC50-202ENST00000392456 BRD1O95696 1058 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 SYT1P21579 422 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 SGIP1Q9BQI5 828 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 MCM9Q9NXL9 1143 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 TTF2Q9UNY4 1162 aaKnown RBP21.86■■□□□ 1.09
CCDC50-202ENST00000392456 PFKFB2O60825 505 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 GIMAP6Q6P9H5 292 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 ATP8A2Q9NTI2 1148 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 DAGLAQ9Y4D2 1042 aa21.86■■□□□ 1.09
CCDC50-202ENST00000392456 CTDNEP1O95476 244 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 LDHCP07864 332 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 POLD1P28340 1107 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 EVCP57679 992 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 RHBDL3P58872 404 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 KRBA2Q6ZNG9 492 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 MAPKAPK5Q8IW41 473 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 GOLGA6L1Q8N7Z2 621 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 MNS1Q8NEH6 495 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 NEK11Q8NG66 645 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 KLF18A0A0U1RQI7 1052 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 YDJCA8MPS7 323 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 BAG3O95817 575 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 FAM163AQ96GL9 167 aaPredicted RBP21.85■■□□□ 1.09
CCDC50-202ENST00000392456 HPS5Q9UPZ3 1129 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 PCDHAC2Q9Y5I4 1007 aa21.85■■□□□ 1.09
CCDC50-202ENST00000392456 SH2B2O14492 632 aaPredicted RBP21.84■■□□□ 1.09
CCDC50-202ENST00000392456 USP5P45974 858 aa21.84■■□□□ 1.09
CCDC50-202ENST00000392456 SART3Q15020 963 aaKnown RBP21.84■■□□□ 1.09
CCDC50-202ENST00000392456 ZNF277Q9NRM2 450 aaPredicted RBP21.84■■□□□ 1.09
CCDC50-202ENST00000392456 GAKO14976 1311 aa21.84■■□□□ 1.09
CCDC50-202ENST00000392456 PPIP5K2O43314 1243 aa21.84■■□□□ 1.09
CCDC50-202ENST00000392456 CC2D2BQ6DHV5 1058 aa21.84■■□□□ 1.09
CCDC50-202ENST00000392456 ZNF274Q96GC6 653 aaPredicted RBP21.84■■□□□ 1.09
CCDC50-202ENST00000392456 ANGEL1Q9UNK9 670 aaKnown RBP21.84■■□□□ 1.09
CCDC50-202ENST00000392456 DLEC1Q9Y238 1755 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 TPM3P06753 285 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 RXRAP19793 462 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 FOXD4L6Q3SYB3 417 aaPredicted RBP21.83■■□□□ 1.09
CCDC50-202ENST00000392456 DACT2Q5SW24 774 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 FOXD4L3Q6VB84 417 aaPredicted RBP21.83■■□□□ 1.09
CCDC50-202ENST00000392456 CCDC91Q7Z6B0 441 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 DDX11Q96FC9 970 aa21.83■■□□□ 1.09
CCDC50-202ENST00000392456 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms