RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
CCDC50-201ENST00000392455 ASPHQ12797 758 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 C11orf95C9JLR9 678 aaPredicted RBP16.29■□□□□ 0.2
CCDC50-201ENST00000392455 ZBTB21Q9ULJ3 1066 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 SMIM23A6NLE4 172 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 TRIM37O94972 964 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 TCEANC2Q96MN5 208 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 CCPG1Q9ULG6 757 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 IGHDP01880 384 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 LMNAP02545 664 aaKnown RBP16.29■□□□□ 0.2
CCDC50-201ENST00000392455 IDI1Q13907 227 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 DHX58Q96C10 678 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 HOOK2Q96ED9 719 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 PPP2R3AQ06190 1150 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 SLC9C2Q5TAH2 1124 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 GRM8O00222 908 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 TTC1Q99614 292 aa16.29■□□□□ 0.2
CCDC50-201ENST00000392455 DIXDC1Q155Q3 683 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 USP48Q86UV5 1035 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 AOPEPQ8N6M6 819 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 TUBB6Q9BUF5 446 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 ZKSCAN5Q9Y2L8 839 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
CCDC50-201ENST00000392455 PAG1Q9NWQ8 432 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 MAGEB6Q8N7X4 407 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 NYXQ9GZU5 481 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 COPS6Q7L5N1 327 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 FBLN1P23142 703 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 IFNA8P32881 189 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 SRRM1Q8IYB3 904 aaKnown RBP16.28■□□□□ 0.2
CCDC50-201ENST00000392455 NOP14P78316 857 aaKnown RBP16.28■□□□□ 0.2
CCDC50-201ENST00000392455 SLC39A6Q13433 755 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 DISP3Q9P2K9 1392 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
CCDC50-201ENST00000392455 PSDA5PKW4 1024 aaPredicted RBP16.27■□□□□ 0.2
CCDC50-201ENST00000392455 KRT8P05787 483 aa16.27■□□□□ 0.2
CCDC50-201ENST00000392455 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.2
CCDC50-201ENST00000392455 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
CCDC50-201ENST00000392455 KRT5P13647 590 aa16.27■□□□□ 0.2
CCDC50-201ENST00000392455 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.2
CCDC50-201ENST00000392455 A0A1B0GVL5 298 aa16.27■□□□□ 0.2
CCDC50-201ENST00000392455 MEIS3Q99687 375 aa16.27■□□□□ 0.2
CCDC50-201ENST00000392455 MICAL1Q8TDZ2 1067 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 ARHGAP6O43182 974 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 GNA14O95837 355 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 KRT15P19012 456 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 STRN3Q13033 797 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 CHST3Q7LGC8 479 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 IWS1Q96ST2 819 aa16.27■□□□□ 0.19
CCDC50-201ENST00000392455 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
CCDC50-201ENST00000392455 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 S100BP04271 92 aaPredicted RBP16.26■□□□□ 0.19
CCDC50-201ENST00000392455 GARSP41250 739 aaKnown RBP16.26■□□□□ 0.19
CCDC50-201ENST00000392455 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 PDE6AP16499 860 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 CASC4Q6P4E1 433 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 ELP1O95163 1332 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 IL16Q14005 1332 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCDC50-201ENST00000392455 SERPINI2O75830 405 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 C8orf37Q96NL8 207 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 TXLNGQ9NUQ3 528 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 HYOU1Q9Y4L1 999 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 RALGAPBQ86X10 1494 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 KRT10P13645 584 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 TRIM55Q9BYV6 548 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 FANCAO15360 1455 aa16.26■□□□□ 0.19
CCDC50-201ENST00000392455 THAP12O43422 761 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 JADE1Q6IE81 842 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 CTAGE3PQ8IX95 158 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 MAD1L1Q9Y6D9 718 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 KCNA4P22459 653 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 KPNA2P52292 529 aaKnown RBP16.25■□□□□ 0.19
CCDC50-201ENST00000392455 RSBN1LQ6PCB5 846 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-201ENST00000392455 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC50-201ENST00000392455 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-201ENST00000392455 ESYT1Q9BSJ8 1104 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
CCDC50-201ENST00000392455 ASIC3Q9UHC3 531 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 TNFAIP3P21580 790 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 RIC8AQ9NPQ8 531 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 GSTA1P08263 222 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 GSTA2P09210 222 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 CEP104O60308 925 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 MAN1A1P33908 653 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 TTI1O43156 1089 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 MX2P20592 715 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 MIGA1Q8NAN2 632 aa16.25■□□□□ 0.19
CCDC50-201ENST00000392455 SPDL1Q96EA4 605 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms