RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 CXorf56Q9H5V9 222 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 FAM204AQ9H8W3 233 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 GPR108Q9NPR9 543 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 DDX21Q9NR30 783 aaKnown RBP eCLIP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 HELLSQ9NRZ9 838 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 FAM217BQ9NTX9 383 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 RAI14Q9P0K7 980 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 DBF4Q9UBU7 674 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ADD3Q9UEY8 706 aaKnown RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 FBXO2Q9UK22 296 aaPredicted RBP3.94□□□□□ -1.78
TRAV39-201ENST00000390466 MAST2Q6P0Q8 1798 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 ZMYM6O95789 1325 aa3.94□□□□□ -1.78
TRAV39-201ENST00000390466 DUOX1Q9NRD9 1551 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TAF1LQ8IZX4 1826 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ABCA3Q99758 1704 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ABCC12Q96J65 1359 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CICQ96RK0 1608 aaPredicted RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 A0A087X0B3 334 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TARSL2A2RTX5 802 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 BHMG1C9JSJ3 638 aaPredicted RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PSMD14O00487 310 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SEMA3EO15041 775 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 EIF3HO15372 352 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 NRDCO43847 1150 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ZEB2O60315 1214 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PPFIA3O75145 1194 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 FSBPO95073 299 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TUBBP07437 444 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CCDC175P0C221 793 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 HSP90B1P14625 803 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PTPREP23469 700 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 GPTP24298 496 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 HSPA1LP34931 641 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SYKP43405 635 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 FXR1P51114 621 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PLCD1P51178 756 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ADKP55263 362 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 HERVK_113P62684 666 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PIP4K2BP78356 416 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TFCP2Q12800 502 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 MMRN1Q13201 1228 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 G3BP1Q13283 466 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SF3B2Q13435 895 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 GCKRQ14397 625 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 MCM6Q14566 821 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SF3A1Q15459 793 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 E2F4Q16254 413 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ZNF827Q17R98 1081 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CFAP100Q494V2 611 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 LONRF3Q496Y0 759 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SLC9C2Q5TAH2 1124 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PAPD7Q5XG87 772 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CPLX2Q6PUV4 134 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 LEKR1Q6ZMV7 388 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 VPS37DQ86XT2 251 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TRMT44Q8IYL2 757 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 USHBP1Q8N6Y0 703 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 IGSF22Q8N9C0 903 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TRIML1Q8N9V2 468 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ACRBPQ8NEB7 543 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 AFAP1L1Q8TED9 768 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 COG1Q8WTW3 980 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CCDC12Q8WUD4 166 aaPredicted RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 STAG1Q8WVM7 1258 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 RIN2Q8WYP3 895 aaPredicted RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 FAXDC2Q96IV6 333 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 C8orf76Q96K31 380 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 FMNL2Q96PY5 1086 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 CDC5LQ99459 802 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PLEKHA4Q9H4M7 779 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 KAT14Q9H8E8 782 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TOMM22Q9NS69 142 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 SAMSN1Q9NSI8 373 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 PUF60Q9UHX1 559 aaKnown RBP3.93□□□□□ -1.78
TRAV39-201ENST00000390466 MCM8Q9UJA3 840 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 DENND2AQ9ULE3 1009 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 NFE2L3Q9Y4A8 694 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 TACC3Q9Y6A5 838 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 MEGF6O75095 1541 aa3.93□□□□□ -1.78
TRAV39-201ENST00000390466 ROBO1Q9Y6N7 1651 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 PPP1R3GB7ZBB8 358 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 UBE2Q2LH0YL09 131 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 KIF1CO43896 1103 aaKnown RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 EIF3JO75822 258 aaKnown RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 CLSTN1O94985 981 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 POLR3DP05423 398 aaPredicted RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 CCDC172P0C7W6 258 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 EPB41P11171 864 aaKnown RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 EIF2S2P20042 333 aaKnown RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 ERCC5P28715 1186 aaPredicted RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 TNFRSF8P28908 595 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 LTKP29376 864 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 MARCKSP29966 332 aaPredicted RBP3.92□□□□□ -1.78
TRAV39-201ENST00000390466 IRAK1P51617 712 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 INHBEP58166 350 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 TUBB4BP68371 445 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 FOXO4P98177 505 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 DDR1Q08345 913 aa3.92□□□□□ -1.78
TRAV39-201ENST00000390466 RBL2Q08999 1139 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms