RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 MATR3P43243 847 aaKnown RBP eCLIP20.08■□□□□ 0.84e-9■■■■■ 32.8
UBL3-201ENST00000380680 SCARF1Q14162 830 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 ZNF827Q17R98 1081 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 A0A1W2PQ27 194 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 A0A1W2PQ64 194 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 A0A1W2PQD8 194 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 KIF23Q02241 960 aaPredicted RBP20.08■□□□□ 0.8
UBL3-201ENST00000380680 FAM196AQ6ZSG2 479 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 SPAG5Q96R06 1193 aa20.08■□□□□ 0.8
UBL3-201ENST00000380680 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.8
UBL3-201ENST00000380680 LUC7L2Q9Y383 392 aaKnown RBP20.08■□□□□ 0.8
UBL3-201ENST00000380680 MYOM1P52179 1685 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 AKR1B15C9JRZ8 316 aaPredicted RBP20.07■□□□□ 0.8
UBL3-201ENST00000380680 SYCP3Q8IZU3 236 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 CERS3Q8IU89 383 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 USP42Q9H9J4 1324 aaKnown RBP20.07■□□□□ 0.8
UBL3-201ENST00000380680 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 RIOK3O14730 519 aaKnown RBP20.07■□□□□ 0.8
UBL3-201ENST00000380680 ZNF500O60304 480 aaPredicted RBP20.07■□□□□ 0.8
UBL3-201ENST00000380680 TCP10Q12799 353 aa20.07■□□□□ 0.8
UBL3-201ENST00000380680 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
UBL3-201ENST00000380680 BICDL2A1A5D9 508 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 SH2B2O14492 632 aaPredicted RBP20.06■□□□□ 0.8
UBL3-201ENST00000380680 TRAF1Q13077 416 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 POLR3EQ9NVU0 708 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 CYP2D7A0A087X1C5 515 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 PDE4DQ08499 809 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 CWC15Q9P013 229 aaKnown RBP20.06■□□□□ 0.8
UBL3-201ENST00000380680 ERLIN2O94905 339 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 TUBB4AP04350 444 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 NOP2P46087 812 aaKnown RBP20.06■□□□□ 0.8
UBL3-201ENST00000380680 TMEM87AQ8NBN3 555 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 BLZF1Q9H2G9 400 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 ATP8A2Q9NTI2 1148 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 SYNRGQ9UMZ2 1314 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 GOLGA6L10A6NI86 522 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 CNGA4Q8IV77 575 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 DRC1Q96MC2 740 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 ALS2CR12Q96Q35 445 aa20.06■□□□□ 0.8
UBL3-201ENST00000380680 SV2BQ7L1I2 683 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 INCENPQ9NQS7 918 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 IMPACTQ9P2X3 320 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 PCDHA5Q9Y5H7 936 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 ITSN1Q15811 1721 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 GOLGA8HP0CJ92 632 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 KRBA2Q6ZNG9 492 aa20.05■□□□□ 0.8
UBL3-201ENST00000380680 TTF2Q9UNY4 1162 aaKnown RBP20.05■□□□□ 0.8
UBL3-201ENST00000380680 SCG2P13521 617 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 USP8P40818 1118 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 CCDC42Q96M95 316 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 GUCA1BQ9UMX6 200 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 NR5A1Q13285 461 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 BMS1Q14692 1282 aaKnown RBP20.04■□□□□ 0.8
UBL3-201ENST00000380680 RBM26Q5T8P6 1007 aaKnown RBP20.04■□□□□ 0.8
UBL3-201ENST00000380680 UIMC1Q96RL1 719 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 ARID5AQ03989 594 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 MAP9Q49MG5 647 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 GPKOWQ92917 476 aaPredicted RBP eCLIP20.04■□□□□ 0.8
UBL3-201ENST00000380680 NRBP1Q9UHY1 535 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 IFNAR1P17181 557 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
UBL3-201ENST00000380680 TBC1D8BQ0IIM8 1120 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 ZNF569Q5MCW4 686 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 STXBP4Q6ZWJ1 553 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 KRT25Q7Z3Z0 450 aa20.04■□□□□ 0.8
UBL3-201ENST00000380680 WDR78Q5VTH9 848 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 BLIDQ8IZY5 108 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 PXDNLA1KZ92 1463 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 LIFRP42702 1097 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 SLC1A4P43007 532 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 CETN1Q12798 172 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 PAK1Q13153 545 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 TICAM2Q86XR7 235 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 EHBP1Q8NDI1 1231 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 KAZALD1Q96I82 304 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 CDHR2Q9BYE9 1310 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 KLRF2D3W0D1 207 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 DPCR1Q3MIW9 517 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBL3-201ENST00000380680 LRWD1Q9UFC0 647 aa20.03■□□□□ 0.8
UBL3-201ENST00000380680 TMCO5BA8MYB1 307 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 C11orf57Q6ZUT1 292 aaPredicted RBP20.02■□□□□ 0.8
UBL3-201ENST00000380680 FCHSD1Q86WN1 690 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 REXO1Q8N1G1 1221 aaKnown RBP20.02■□□□□ 0.8
UBL3-201ENST00000380680 SRRTQ9BXP5 876 aaKnown RBP20.02■□□□□ 0.8
UBL3-201ENST00000380680 PTGDRQ13258 359 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 STOX1Q6ZVD7 989 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 TBC1D10CQ8IV04 446 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 CSGALNACT2Q8N6G5 542 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 TDRD7Q8NHU6 1098 aaKnown RBP20.02■□□□□ 0.8
UBL3-201ENST00000380680 LZTS2Q9BRK4 669 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 RNF26Q9BY78 433 aaPredicted RBP20.02■□□□□ 0.8
UBL3-201ENST00000380680 FANCLQ9NW38 375 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 CTAGE9A4FU28 777 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 SMCO2A6NFE2 343 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 SEMA3EO15041 775 aa20.02■□□□□ 0.8
UBL3-201ENST00000380680 ATP2B4P23634 1241 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms