RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZSWIM5Q9P217 1185 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 RDXP35241 583 aaKnown RBP20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 CCDC174Q6PII3 467 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 REXO1Q8N1G1 1221 aaKnown RBP20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 RGS12O14924 1447 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 FAM13AO94988 1023 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 USP17L8P0C7I0 530 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 SV2BQ7L1I2 683 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 INCENPQ9NQS7 918 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 NARFQ9UHQ1 456 aa20.29■□□□□ 0.84
PTPDC1-202ENST00000375360 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 ADCY7P51828 1080 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 UBXN1Q04323 297 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 CBX8Q9HC52 389 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 LRWD1Q9UFC0 647 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 CYP2E1P05181 493 aaPredicted RBP20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 PDE4DQ08499 809 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 NOSTRINQ8IVI9 506 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 KIFC2Q96AC6 838 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 VPS16Q9H269 839 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 CEP135Q66GS9 1140 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 PRDX5P30044 214 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 DYMQ7RTS9 669 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 CLIC6Q96NY7 704 aa20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 FTOQ9C0B1 505 aaKnown RBP eCLIP20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 BSDC1Q9NW68 430 aaPredicted RBP20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
PTPDC1-202ENST00000375360 DDX39AO00148 427 aaKnown RBP20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 ERLIN2O94905 339 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 DYNLL2Q96FJ2 89 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 RAD17O75943 681 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 PRPF4BQ13523 1007 aaKnown RBP20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 CCDC102AQ96A19 550 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 JADE2Q9NQC1 790 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 MYCLP12524 364 aaPredicted RBP20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 PLCD1P51178 756 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 MAEAQ7L5Y9 396 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 MINPP1Q9UNW1 487 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 ZMYM6O95789 1325 aa20.27■□□□□ 0.84
PTPDC1-202ENST00000375360 TRAF5O00463 557 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 CHGBP05060 677 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 PAFAH1B1P43034 410 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 INF2Q27J81 1249 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 CERKLQ49MI3 558 aaPredicted RBP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 BLZF1Q9H2G9 400 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 NSUN7Q8NE18 718 aaKnown RBP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 SNX29Q8TEQ0 813 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 MECOMQ03112 1051 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 SCARF1Q14162 830 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 HS2ST1Q7LGA3 356 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 MARCH10Q8NA82 808 aaPredicted RBP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 AIFM3Q96NN9 605 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 IQCEQ6IPM2 695 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 GPT2Q8TD30 523 aa20.26■□□□□ 0.83
PTPDC1-202ENST00000375360 ZNF445P59923 1031 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 GRAPQ13588 217 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 GPIHBP1Q8IV16 184 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 GRAPLQ8TC17 118 aaPredicted RBP20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 FOXO4P98177 505 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 KRT25Q7Z3Z0 450 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 SERTAD1Q9UHV2 236 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 MED23Q9ULK4 1368 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 NCAPH2Q6IBW4 605 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 TMCO3Q6UWJ1 677 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 COL15A1P39059 1388 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 STRBPQ96SI9 672 aaKnown RBP20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 CTNND2Q9UQB3 1225 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 CLIC4Q9Y696 253 aa20.25■□□□□ 0.83
PTPDC1-202ENST00000375360 PNOCQ13519 176 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 CUL4AQ13619 759 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 GJB4Q9NTQ9 266 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 TBC1D7Q9P0N9 293 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 NRKQ7Z2Y5 1582 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 PFKFB1P16118 471 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 PCDHA7Q9UN72 937 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 SCG2P13521 617 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 KRT13P13646 458 aa20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 V9GYY5 206 aaPredicted RBP20.24■□□□□ 0.83
PTPDC1-202ENST00000375360 DIP2BQ9P265 1576 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 H7C1D1 291 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 SEMA3EO15041 775 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 BLIDQ8IZY5 108 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 LZTFL1Q9NQ48 299 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 RASGRP4Q8TDF6 673 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 ZNF827Q17R98 1081 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 ARHGAP27Q6ZUM4 889 aa20.23■□□□□ 0.83
PTPDC1-202ENST00000375360 MPHOSPH6Q99547 160 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms