RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 MX1P20591 662 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 EVX2Q03828 476 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 WDR18Q9BV38 432 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 PUS7LQ9H0K6 701 aaKnown RBP27.35■■□□□ 1.97
COL9A2-201ENST00000372736 EFCC1Q9HA90 598 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 AS3MTQ9HBK9 375 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 MCM9Q9NXL9 1143 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 CPA4Q9UI42 421 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 AGTPBP1Q9UPW5 1226 aa27.35■■□□□ 1.97
COL9A2-201ENST00000372736 SUPT16HQ9Y5B9 1047 aaKnown RBP27.35■■□□□ 1.97
COL9A2-201ENST00000372736 POLR3DP05423 398 aaPredicted RBP27.34■■□□□ 1.97
COL9A2-201ENST00000372736 GABPAQ06546 454 aa27.34■■□□□ 1.97
COL9A2-201ENST00000372736 TREML2Q5T2D2 321 aa27.34■■□□□ 1.97
COL9A2-201ENST00000372736 ANKRD45Q5TZF3 282 aa27.34■■□□□ 1.97
COL9A2-201ENST00000372736 PROCA1Q8NCQ7 364 aaPredicted RBP27.34■■□□□ 1.97
COL9A2-201ENST00000372736 ERC2O15083 957 aa27.33■■□□□ 1.97
COL9A2-201ENST00000372736 GLRX3O76003 335 aaKnown RBP27.33■■□□□ 1.97
COL9A2-201ENST00000372736 SHMT1P34896 483 aa27.33■■□□□ 1.97
COL9A2-201ENST00000372736 HMGCS2P54868 508 aa27.33■■□□□ 1.97
COL9A2-201ENST00000372736 LACTBP83111 547 aaPredicted RBP27.33■■□□□ 1.97
COL9A2-201ENST00000372736 ARHGAP39Q9C0H5 1083 aa27.33■■□□□ 1.97
COL9A2-201ENST00000372736 CYP2D6P10635 497 aa27.32■■□□□ 1.96
COL9A2-201ENST00000372736 SH3D19Q5HYK7 790 aa27.32■■□□□ 1.96
COL9A2-201ENST00000372736 ATP8A2Q9NTI2 1148 aa27.32■■□□□ 1.96
COL9A2-201ENST00000372736 MYH8P13535 1937 aa27.31■■□□□ 1.96
COL9A2-201ENST00000372736 GH2P01242 217 aa27.31■■□□□ 1.96
COL9A2-201ENST00000372736 BCRP11274 1271 aa27.31■■□□□ 1.96
COL9A2-201ENST00000372736 MTMR2Q13614 643 aa27.31■■□□□ 1.96
COL9A2-201ENST00000372736 ZBTB47Q9UFB7 747 aaPredicted RBP27.31■■□□□ 1.96
COL9A2-201ENST00000372736 PTPN22Q9Y2R2 807 aa27.31■■□□□ 1.96
COL9A2-201ENST00000372736 SMC5Q8IY18 1101 aa27.3■■□□□ 1.96
COL9A2-201ENST00000372736 APPBP2Q92624 585 aa27.3■■□□□ 1.96
COL9A2-201ENST00000372736 RNF113AO15541 343 aaKnown RBP27.29■■□□□ 1.96
COL9A2-201ENST00000372736 BACE1P56817 501 aa27.29■■□□□ 1.96
COL9A2-201ENST00000372736 CERKLQ49MI3 558 aaPredicted RBP27.29■■□□□ 1.96
COL9A2-201ENST00000372736 OSBP2Q969R2 916 aa27.29■■□□□ 1.96
COL9A2-201ENST00000372736 SLC4A4Q9Y6R1 1079 aa27.29■■□□□ 1.96
COL9A2-201ENST00000372736 MGAMO43451 1857 aa27.28■■□□□ 1.96
COL9A2-201ENST00000372736 ZFYP08048 801 aaPredicted RBP27.28■■□□□ 1.96
COL9A2-201ENST00000372736 CTGFP29279 349 aa27.28■■□□□ 1.96
COL9A2-201ENST00000372736 KIF22Q14807 665 aa27.28■■□□□ 1.96
COL9A2-201ENST00000372736 ARHGEF6Q15052 776 aa27.28■■□□□ 1.96
COL9A2-201ENST00000372736 STRBPQ96SI9 672 aaKnown RBP27.28■■□□□ 1.96
COL9A2-201ENST00000372736 RWDD1Q9H446 243 aaPredicted RBP27.28■■□□□ 1.96
COL9A2-201ENST00000372736 STAP2Q9UGK3 403 aa27.28■■□□□ 1.96
COL9A2-201ENST00000372736 ABCB5Q2M3G0 1257 aa27.27■■□□□ 1.96
COL9A2-201ENST00000372736 SLC44A5Q8NCS7 719 aa27.27■■□□□ 1.96
COL9A2-201ENST00000372736 USP17L10C9JJH3 530 aa27.26■■□□□ 1.95
COL9A2-201ENST00000372736 IGHDP01880 384 aa27.26■■□□□ 1.95
COL9A2-201ENST00000372736 SMCR8Q8TEV9 937 aaPredicted RBP27.26■■□□□ 1.95
COL9A2-201ENST00000372736 DYNLL2Q96FJ2 89 aa27.26■■□□□ 1.95
COL9A2-201ENST00000372736 PNMA3Q9UL41 463 aa27.26■■□□□ 1.95
COL9A2-201ENST00000372736 CENPFP49454 3210 aa27.26■■□□□ 1.95
COL9A2-201ENST00000372736 CYP2D7A0A087X1C5 515 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 C19orf81C9J6K1 198 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 SMIM22K7EJ46 135 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 PDE1AP54750 535 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 C12orf60Q5U649 245 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 TRIM47Q96LD4 638 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 TAOK2Q9UL54 1235 aa27.25■■□□□ 1.95
COL9A2-201ENST00000372736 USP17L12C9JPN9 530 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 USP17L21D6R901 530 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 M0R2C6 588 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 GNRH1P01148 92 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 GUCY1A2P33402 732 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 SOX10P56693 466 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 RAB3GAP1Q15042 981 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 DDRGK1Q96HY6 314 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 FSD1Q9BTV5 496 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 LNPKQ9C0E8 428 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 ASCC2Q9H1I8 757 aaPredicted RBP27.24■■□□□ 1.95
COL9A2-201ENST00000372736 TMOD4Q9NZQ9 345 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 SWAP70Q9UH65 585 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 PTCH2Q9Y6C5 1203 aa27.24■■□□□ 1.95
COL9A2-201ENST00000372736 GPAA1O43292 621 aa27.23■■□□□ 1.95
COL9A2-201ENST00000372736 ECM2O94769 699 aaPredicted RBP27.23■■□□□ 1.95
COL9A2-201ENST00000372736 PSMC4P43686 418 aa27.23■■□□□ 1.95
COL9A2-201ENST00000372736 RGS19P49795 217 aa27.23■■□□□ 1.95
COL9A2-201ENST00000372736 PABPC4Q13310 644 aaKnown RBP eCLIP27.23■■□□□ 1.95
COL9A2-201ENST00000372736 LRRFIP1Q32MZ4 808 aaKnown RBP27.23■■□□□ 1.95
COL9A2-201ENST00000372736 CTR9Q6PD62 1173 aa27.23■■□□□ 1.95
COL9A2-201ENST00000372736 CABP5Q9NP86 173 aa27.23■■□□□ 1.95
COL9A2-201ENST00000372736 GSG1L2A8MUP6 293 aa27.22■■□□□ 1.95
COL9A2-201ENST00000372736 AMOTL1Q8IY63 956 aa27.22■■□□□ 1.95
COL9A2-201ENST00000372736 EMILIN3Q9NT22 766 aa27.22■■□□□ 1.95
COL9A2-201ENST00000372736 SEPT2Q15019 361 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 B4GALNT3Q6L9W6 998 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 USP17L2Q6R6M4 530 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 C16orf86Q6ZW13 317 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 ACER1Q8TDN7 264 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 ARMC5Q96C12 935 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 C12orf42Q96LP6 360 aa27.21■■□□□ 1.95
COL9A2-201ENST00000372736 EPB41L4AQ9HCS5 686 aaPredicted RBP27.21■■□□□ 1.95
COL9A2-201ENST00000372736 ARPP21Q9UBL0 812 aaPredicted RBP27.21■■□□□ 1.95
COL9A2-201ENST00000372736 OSBPP22059 807 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 HOXA7P31268 230 aaPredicted RBP27.2■■□□□ 1.94
COL9A2-201ENST00000372736 FAM110CQ1W6H9 321 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 ZMYM1Q5SVZ6 1142 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 GIMAP6Q6P9H5 292 aa27.2■■□□□ 1.94
COL9A2-201ENST00000372736 ANKRD13CQ8N6S4 541 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms