RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 WDR17Q8IZU2 1322 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 SV2BQ7L1I2 683 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 MAATS1Q7Z4T9 603 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 WDR66Q8TBY9 1149 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 NOC4LQ9BVI4 516 aaKnown RBP18.4■□□□□ 0.54
SCAF1-201ENST00000360565 WWC3Q9ULE0 1092 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 CYP2E1P05181 493 aaPredicted RBP18.4■□□□□ 0.54
SCAF1-201ENST00000360565 TXKP42681 527 aa18.4■□□□□ 0.54
SCAF1-201ENST00000360565 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
SCAF1-201ENST00000360565 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
SCAF1-201ENST00000360565 MACROD2A1Z1Q3 448 aa18.39■□□□□ 0.53
SCAF1-201ENST00000360565 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
SCAF1-201ENST00000360565 POLR3EQ9NVU0 708 aa18.39■□□□□ 0.53
SCAF1-201ENST00000360565 ARID4AP29374 1257 aaPredicted RBP18.39■□□□□ 0.53
SCAF1-201ENST00000360565 MAPKAPK5Q8IW41 473 aa18.39■□□□□ 0.53
SCAF1-201ENST00000360565 TRAF5O00463 557 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 CCNT1O60563 726 aaKnown RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 CHRNDQ07001 517 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 ADD2P35612 726 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 SEPT7Q16181 437 aaKnown RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 FAM98CQ17RN3 349 aaKnown RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 LONRF3Q496Y0 759 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 KIF23Q02241 960 aaPredicted RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 ZSCAN10Q96SZ4 725 aaPredicted RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 INO80Q9ULG1 1556 aaPredicted RBP18.38■□□□□ 0.53
SCAF1-201ENST00000360565 MED23Q9ULK4 1368 aa18.38■□□□□ 0.53
SCAF1-201ENST00000360565 WDHD1O75717 1129 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-201ENST00000360565 NLRP10Q86W26 655 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 TTF2Q9UNY4 1162 aaKnown RBP18.37■□□□□ 0.53
SCAF1-201ENST00000360565 IQGAP1P46940 1657 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 CHMP4BP1P59074 171 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 ETF1P62495 437 aaKnown RBP18.37■□□□□ 0.53
SCAF1-201ENST00000360565 ERCC6LQ2NKX8 1250 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 TIGD1Q96MW7 591 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 POTEJP0CG39 1038 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 ERCC3P19447 782 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 CETN2P41208 172 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 TUBB4BP68371 445 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 NAPGQ99747 312 aaPredicted RBP18.37■□□□□ 0.53
SCAF1-201ENST00000360565 DESI2Q9BSY9 194 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 ATP10DQ9P241 1426 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 CAPN2P17655 700 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 MRPL12P52815 198 aaKnown RBP18.37■□□□□ 0.53
SCAF1-201ENST00000360565 CYP26C1Q6V0L0 522 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 TMTC1Q8IUR5 882 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
SCAF1-201ENST00000360565 NONOQ15233 471 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCAF1-201ENST00000360565 IFI16Q16666 785 aaKnown RBP18.36■□□□□ 0.53
SCAF1-201ENST00000360565 SMAP1Q8IYB5 467 aaPredicted RBP18.36■□□□□ 0.53
SCAF1-201ENST00000360565 DYDC1Q8WWB3 177 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 FAM107BQ9H098 131 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 VPS18Q9P253 973 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
SCAF1-201ENST00000360565 CTNNBL1Q8WYA6 563 aaPredicted RBP18.36■□□□□ 0.53
SCAF1-201ENST00000360565 SLF1Q9BQI6 1058 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 TRIM14Q14142 442 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 NELFBQ8WX92 580 aa18.36■□□□□ 0.53
SCAF1-201ENST00000360565 GSTTP1A0A1W2PQM5 241 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 PRKAB2O43741 272 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 GPIHBP1Q8IV16 184 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 CPS1P31327 1500 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 HSF2BPO75031 334 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 PDLIM2Q96JY6 352 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 LOC102724428A0A0B4J2F2 783 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 IL6STP40189 918 aaPredicted RBP18.35■□□□□ 0.53
SCAF1-201ENST00000360565 SIK1P57059 783 aa18.35■□□□□ 0.53
SCAF1-201ENST00000360565 TUBBP07437 444 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 LRWD1Q9UFC0 647 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 PTPN21Q16825 1174 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 RNF187Q5TA31 235 aaPredicted RBP18.34■□□□□ 0.53
SCAF1-201ENST00000360565 CNNM4Q6P4Q7 775 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 TTLL11Q8NHH1 800 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 PIGBQ92521 554 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 IL25Q9H293 177 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
SCAF1-201ENST00000360565 DYMQ7RTS9 669 aa18.33■□□□□ 0.53
SCAF1-201ENST00000360565 UIMC1Q96RL1 719 aa18.33■□□□□ 0.53
SCAF1-201ENST00000360565 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.531e-15■■■■■ 136.6
SCAF1-201ENST00000360565 PPP1R2P41236 205 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 TRAF1Q13077 416 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 PTGDRQ13258 359 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 NR5A1Q13285 461 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 KRT25Q7Z3Z0 450 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 NCAPD2Q15021 1401 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 PNMA1Q8ND90 353 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 RSPH14Q9UHP6 348 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
SCAF1-201ENST00000360565 CRKLP46109 303 aaKnown RBP18.32■□□□□ 0.52
SCAF1-201ENST00000360565 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
SCAF1-201ENST00000360565 ARPP21Q9UBL0 812 aaPredicted RBP18.32■□□□□ 0.52
SCAF1-201ENST00000360565 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms