RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DNAJC25Q9H1X3 360 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 UBAP1Q9NZ09 502 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 GUCY2CP25092 1073 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ST13P50502 369 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 LRRC8BQ6P9F7 803 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 MGARPQ8TDB4 240 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 IMPG2Q9BZV3 1241 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 VPS37BQ9H9H4 285 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 FGFR1OP2Q9NVK5 253 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 STXBP3O00186 592 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ATP5HO75947 161 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 TEX9Q8N6V9 391 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 RABGGTAQ92696 567 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 SART1O43290 800 aaKnown RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 POLD1P28340 1107 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ATP1A2P50993 1020 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 CUL5Q93034 780 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 ZMYND8Q9ULU4 1186 aaPredicted RBP6.81□□□□□ -1.32
VCAN-203ENST00000343200 AGTPBP1Q9UPW5 1226 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 SOGA1O94964 1423 aa6.81□□□□□ -1.32
VCAN-203ENST00000343200 HNRNPCL2B2RXH8 293 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 HNRNPCL1O60812 293 aaKnown RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 RNF41Q9H4P4 317 aaPredicted RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 ZNF229Q9UJW7 825 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 MYO5AQ9Y4I1 1855 aaKnown RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 SVILO95425 2214 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 PRPF40BQ6NWY9 871 aaKnown RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 SAR1BQ9Y6B6 198 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 RAB14P61106 215 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 SLC38A10Q9HBR0 1119 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 ADAMTS8Q9UP79 889 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 CAB39Q9Y376 341 aaPredicted RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 CACNA1SQ13698 1873 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 RPS6KA2Q15349 733 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 CNNM1Q9NRU3 951 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TMEM110-MUSTN1A8MSY1 372 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 PYGLP06737 847 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 CASP10Q92851 521 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 SERPINI1Q99574 410 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TYW1Q9NV66 732 aaKnown RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 GID8Q9NWU2 228 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 DCDC2Q9UHG0 476 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 ABCC11Q96J66 1382 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 MMEL1Q495T6 779 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 OSBPL1AQ9BXW6 950 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 CXorf56Q9H5V9 222 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 MYO1CO00159 1063 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 PDHA1P08559 390 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 GCFC2P16383 781 aaKnown RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 STX1BP61266 288 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TWISTNBQ3B726 338 aaPredicted RBP6.8□□□□□ -1.32
VCAN-203ENST00000343200 DYDC2Q96IM9 177 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 KRT12Q99456 494 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TRIM15Q9C019 465 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 PARVBQ9HBI1 364 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 ABCF2Q9UG63 623 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TLK1Q9UKI8 766 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TMEM191CA6NGB0 347 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 MAFGO15525 162 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TMEM191BP0C7N4 346 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 RRAGBQ5VZM2 374 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 IGSF22Q8N9C0 903 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 RFWD2Q8NHY2 731 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 KIF1BPQ96EK5 621 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 BATF3Q9NR55 127 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 TMOD2Q9NZR1 351 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 CARMIL1Q5VZK9 1371 aa6.8□□□□□ -1.32
VCAN-203ENST00000343200 CCDC169A6NNP5 214 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 PMS1P54277 932 aaKnown RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 E2F5Q15329 346 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 SCN9AQ15858 1988 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 HS2ST1Q7LGA3 356 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 TEKT1Q969V4 418 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 SPZ1Q9BXG8 430 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 IFIH1Q9BYX4 1025 aaKnown RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 ATP6V0A4Q9HBG4 840 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 CACNA1DQ01668 2161 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 CA8P35219 290 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 KRT82Q9NSB4 513 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 KIAA2026Q5HYC2 2103 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 IL9RQ01113 521 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 TFIP11Q9UBB9 837 aaKnown RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 PACSIN2Q9UNF0 486 aaPredicted RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 MYLKQ15746 1914 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 TTC41PQ6P2S7 1318 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 LRRIQ3A6PVS8 624 aaPredicted RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 SYCE1LA8MT33 242 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 EXOC5O00471 708 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 STX17P56962 302 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 IRX5P78411 483 aaPredicted RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 MAP3K10Q02779 954 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 NONOQ15233 471 aaKnown RBP eCLIP6.79□□□□□ -1.32
VCAN-203ENST00000343200 DDX28Q9NUL7 540 aaKnown RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 WWC3Q9ULE0 1092 aa6.79□□□□□ -1.32
VCAN-203ENST00000343200 TRIP12Q14669 1992 aaPredicted RBP6.79□□□□□ -1.32
VCAN-203ENST00000343200 H0YC42 278 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms