RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 APBA2Q99767 749 aa20.89■□□□□ 0.93
TRA2B-202ENST00000342294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.89■□□□□ 0.93
TRA2B-202ENST00000342294 ATAD5Q96QE3 1844 aa20.89■□□□□ 0.93
TRA2B-202ENST00000342294 TFCP2Q12800 502 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 ALDH1L2Q3SY69 923 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 PLEKHH3Q7Z736 793 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 TEX11Q8IYF3 940 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 FAM161BQ96MY7 647 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 DNAJC18Q9H819 358 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 AKAP2Q9Y2D5 859 aa20.88■□□□□ 0.93
TRA2B-202ENST00000342294 USP17L10C9JJH3 530 aa20.87■□□□□ 0.93
TRA2B-202ENST00000342294 SHROOM1Q2M3G4 852 aaPredicted RBP20.87■□□□□ 0.93
TRA2B-202ENST00000342294 SPATA5Q8NB90 893 aa20.87■□□□□ 0.93
TRA2B-202ENST00000342294 SH3RF3Q8TEJ3 882 aaPredicted RBP20.87■□□□□ 0.93
TRA2B-202ENST00000342294 GTF3C2Q8WUA4 911 aaPredicted RBP20.87■□□□□ 0.93
TRA2B-202ENST00000342294 LBHD1Q9BQE6 289 aaPredicted RBP20.87■□□□□ 0.93
TRA2B-202ENST00000342294 DHX36Q9H2U1 1008 aaKnown RBP20.87■□□□□ 0.93
TRA2B-202ENST00000342294 MAP2K5Q13163 448 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 FAM9BQ8IZU0 186 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 SENP6Q9GZR1 1112 aaPredicted RBP20.86■□□□□ 0.93
TRA2B-202ENST00000342294 EMILIN3Q9NT22 766 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 GINM1Q9NU53 330 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 RAI14Q9P0K7 980 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 HDAC5Q9UQL6 1122 aa20.86■□□□□ 0.93
TRA2B-202ENST00000342294 ARID4AP29374 1257 aaPredicted RBP20.85■□□□□ 0.93
TRA2B-202ENST00000342294 ZNF697Q5TEC3 545 aa20.85■□□□□ 0.93
TRA2B-202ENST00000342294 FLRT1Q9NZU1 646 aa20.85■□□□□ 0.93
TRA2B-202ENST00000342294 SIPA1L1O43166 1804 aa20.85■□□□□ 0.93
TRA2B-202ENST00000342294 E9PSI1 815 aa20.84■□□□□ 0.93
TRA2B-202ENST00000342294 FOXP4Q8IVH2 680 aaPredicted RBP20.84■□□□□ 0.93
TRA2B-202ENST00000342294 CCAR1Q8IX12 1150 aaKnown RBP20.84■□□□□ 0.93
TRA2B-202ENST00000342294 EDC3Q96F86 508 aaKnown RBP20.84■□□□□ 0.93
TRA2B-202ENST00000342294 CDX2Q99626 313 aaPredicted RBP20.84■□□□□ 0.93
TRA2B-202ENST00000342294 PAGR1Q9BTK6 254 aa20.84■□□□□ 0.93
TRA2B-202ENST00000342294 ANP32CO43423 234 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 CNMDO75829 334 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 MEIS3Q99687 375 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 DDX20Q9UHI6 824 aaKnown RBP20.83■□□□□ 0.93
TRA2B-202ENST00000342294 ZBTB21Q9ULJ3 1066 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 RABGAP1Q9Y3P9 1069 aa20.83■□□□□ 0.93
TRA2B-202ENST00000342294 GDF11O95390 407 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 IGHA2P01877 340 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 PPP4CP60510 307 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 MFSD14CQ5VZR4 134 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 LPAR1Q92633 364 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 NEUROD6Q96NK8 337 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 SEMA6BQ9H3T3 888 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 MAST2Q6P0Q8 1798 aa20.82■□□□□ 0.92
TRA2B-202ENST00000342294 LAMA2P24043 3122 aaKnown RBP20.82■□□□□ 0.92
TRA2B-202ENST00000342294 SLC15A5A6NIM6 579 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 DNM1LO00429 736 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 MSCO60682 206 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 HOXC6P09630 235 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 MCAMP43121 646 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 ATN1P54259 1190 aaPredicted RBP20.81■□□□□ 0.92
TRA2B-202ENST00000342294 SLFN5Q08AF3 891 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 MTX1Q13505 466 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L2Q6R6M4 530 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 MAFAQ8NHW3 353 aaPredicted RBP20.81■□□□□ 0.92
TRA2B-202ENST00000342294 C12orf42Q96LP6 360 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 PRDM6Q9NQX0 595 aa20.81■□□□□ 0.92
TRA2B-202ENST00000342294 PLCG2P16885 1265 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 PTPREP23469 700 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 RTP1P59025 263 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 SHHQ15465 462 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 MAPKAPK5Q8IW41 473 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 TGFBRAP1Q8WUH2 860 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRA2B-202ENST00000342294 LRP2BPQ9P2M1 347 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 PALD1Q9ULE6 856 aa20.8■□□□□ 0.92
TRA2B-202ENST00000342294 NOB1Q9ULX3 412 aaKnown RBP20.8■□□□□ 0.92
TRA2B-202ENST00000342294 FLT1P17948 1338 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 SRGAP3O43295 1099 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 GLRX3O76003 335 aaKnown RBP20.79■□□□□ 0.92
TRA2B-202ENST00000342294 BAG3O95817 575 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 CCNA1P78396 465 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
TRA2B-202ENST00000342294 TRPV1Q8NER1 839 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 NOL10Q9BSC4 688 aaKnown RBP20.79■□□□□ 0.92
TRA2B-202ENST00000342294 PRKAG2Q9UGJ0 569 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 NDUFB9Q9Y6M9 179 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 DNAH12Q6ZR08 3092 aa20.79■□□□□ 0.92
TRA2B-202ENST00000342294 FRMPD3Q5JV73 1810 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L15C9J2P7 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L13C9JLJ4 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L11C9JVI0 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L18D6R9N7 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L22D6RA61 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L17D6RBQ6 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L19D6RCP7 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L20D6RJB6 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 USP17L24Q0WX57 530 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 C9orf50Q5SZB4 431 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
TRA2B-202ENST00000342294 ADGRA1Q86SQ6 560 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 NPLOC4Q8TAT6 608 aa20.78■□□□□ 0.92
TRA2B-202ENST00000342294 API5Q9BZZ5 524 aaKnown RBP20.78■□□□□ 0.92
TRA2B-202ENST00000342294 VCANP13611 3396 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms