RNA–Protein interactions for RNA: ENST00000338008.9

ZFYVE16-201, Transcript of zinc finger FYVE-type containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE16, Length 6,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE16-201ENST00000338008 SH2B1Q9NRF2 756 aaPredicted RBP4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 CEP126Q9P2H0 1117 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 SSC5DA1L4H1 1573 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 MROH7-TTC4A0A0A0MT08 1334 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 STX6O43752 255 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 SLURP2P0DP57 97 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 G3BP1Q13283 466 aaKnown RBP eCLIP4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 IFNL3Q8IZI9 196 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 CALR3Q96L12 384 aaKnown RBP4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 CCDC85AQ96PX6 553 aaPredicted RBP4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 INTS13Q9NVM9 706 aa4.83□□□□□ -1.64
ZFYVE16-201ENST00000338008 GYG1P46976 350 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 GHRHRQ02643 423 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 GRIN1Q05586 938 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 OLFM4Q6UX06 510 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 LINC00301Q8NCQ3 95 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 CRAMP1Q96RY5 1269 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 SUDS3Q9H7L9 328 aaPredicted RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 STK36Q9NRP7 1315 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 A0A087X0B3 334 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 SEMA3EO15041 775 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 CASTP20810 708 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 EHHADHQ08426 723 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 ENAHQ8N8S7 591 aaPredicted RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 BORCS6Q96GS4 357 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 GOLPH3LQ9H4A5 285 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 DDX4Q9NQI0 724 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 TRMT112Q9UI30 125 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 CEP83Q9Y592 693 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 KIF23Q02241 960 aaPredicted RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 RRP1BQ14684 758 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 NAALADL2Q58DX5 795 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 B3GNT9Q6UX72 402 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 BRF1Q92994 677 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 ZBTB9Q96C00 473 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 C8orf37Q96NL8 207 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 NEK1Q96PY6 1258 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 SLC5A1P13866 664 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 SLC20A2Q08357 652 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 TMEM139Q8IV31 216 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 USP28Q96RU2 1077 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 GOLGA6L3A6NEY3 463 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 KIF20AO95235 890 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 C12orf60Q5U649 245 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 USP48Q86UV5 1035 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 ACRBPQ8NEB7 543 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 UTP14AQ9BVJ6 771 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 NCOA5Q9HCD5 579 aaKnown RBP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 NIP7Q9Y221 180 aaKnown RBP eCLIP4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 LRRC37A2A6NM11 1700 aa4.82□□□□□ -1.64
ZFYVE16-201ENST00000338008 E2F4Q16254 413 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 IL17AQ16552 155 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 ITFG2Q969R8 447 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 YDJCA8MPS7 323 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 GRAPQ13588 217 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 ZSCAN23Q3MJ62 389 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 USP49Q70CQ1 688 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 GRAPLQ8TC17 118 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 FAM210AQ96ND0 272 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 PES1O00541 588 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 PUS10Q3MIT2 529 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 HS6ST3Q8IZP7 471 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 TBC1D16Q8TBP0 767 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 RILPL2Q969X0 211 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 JAKMIP1Q96N16 626 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 MYH4Q9Y623 1939 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 PALM3A6NDB9 673 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 SLC9C2Q5TAH2 1124 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 POLR3EQ9NVU0 708 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 U3KPZ7 1027 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 NAT1P18440 290 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 CLK2P49760 499 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 GYS2P54840 703 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 DNM1Q05193 864 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 TSR1Q2NL82 804 aaKnown RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 CCDC94Q9BW85 323 aaPredicted RBP4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 GDPD2Q9HCC8 539 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 PFASO15067 1338 aa4.81□□□□□ -1.64
ZFYVE16-201ENST00000338008 HIP1O00291 1037 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 IFIT2P09913 472 aaKnown RBP4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 NUCB2P80303 420 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 RASGRP2Q7LDG7 609 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 CGNQ9P2M7 1197 aaKnown RBP4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 GABBR1Q9UBS5 961 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 CNTNAP5Q8WYK1 1306 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 FECHP22830 423 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 TATDN1Q6P1N9 297 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 SHC4Q6S5L8 630 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 MBOAT7Q96N66 472 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 C5orf42Q9H799 3197 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 MYH8P13535 1937 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 Q6ZUG5 572 aa4.8□□□□□ -1.64
ZFYVE16-201ENST00000338008 TTC30BQ8N4P2 665 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms