RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TPM3P06753 285 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 CCDC186Q7Z3E2 898 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 CRNKL1Q9BZJ0 848 aaKnown RBP25.28■■□□□ 1.64
TPM4-201ENST00000300933 CTIFO43310 598 aaKnown RBP25.28■■□□□ 1.64
TPM4-201ENST00000300933 MAP3K14Q99558 947 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 VPS54Q9P1Q0 977 aa25.28■■□□□ 1.64
TPM4-201ENST00000300933 IRS2Q9Y4H2 1338 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 CERKQ8TCT0 537 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 DYNLL2Q96FJ2 89 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 A0A1W2PQ27 194 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 A0A1W2PQ64 194 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 A0A1W2PQD8 194 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 FAM205CA6NFA0 338 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 RGL2O15211 777 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 ONECUT3O60422 494 aaPredicted RBP25.27■■□□□ 1.64
TPM4-201ENST00000300933 NAA30Q147X3 362 aaPredicted RBP25.27■■□□□ 1.64
TPM4-201ENST00000300933 PTPAQ15257 358 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 TMTC2Q8N394 836 aa25.27■■□□□ 1.64
TPM4-201ENST00000300933 V9GY48 417 aaPredicted RBP25.27■■□□□ 1.64
TPM4-201ENST00000300933 MMP1P03956 469 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 TOB1P50616 345 aaPredicted RBP25.26■■□□□ 1.63
TPM4-201ENST00000300933 GRIN1Q05586 938 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 SHC4Q6S5L8 630 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 SH3RF3Q8TEJ3 882 aaPredicted RBP25.26■■□□□ 1.63
TPM4-201ENST00000300933 MTMR7Q9Y216 660 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 TIAM2Q8IVF5 1701 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 NCBP1Q09161 790 aaKnown RBP25.26■■□□□ 1.63
TPM4-201ENST00000300933 IQCB1Q15051 598 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 STX1AQ16623 288 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 IQCA1Q86XH1 822 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 NOSTRINQ8IVI9 506 aa25.26■■□□□ 1.63
TPM4-201ENST00000300933 CTAGE5O15320 804 aa25.25■■□□□ 1.63
TPM4-201ENST00000300933 LDHBP07195 334 aaKnown RBP25.25■■□□□ 1.63
TPM4-201ENST00000300933 SBF2Q86WG5 1849 aa25.25■■□□□ 1.63
TPM4-201ENST00000300933 UFL1O94874 794 aa25.25■■□□□ 1.63
TPM4-201ENST00000300933 COL24A1Q17RW2 1714 aa25.25■■□□□ 1.63
TPM4-201ENST00000300933 ECM29Q5VYK3 1845 aa25.24■■□□□ 1.63
TPM4-201ENST00000300933 DPCR1Q3MIW9 517 aa25.24■■□□□ 1.63
TPM4-201ENST00000300933 CATIPQ7Z7H3 387 aa25.24■■□□□ 1.63
TPM4-201ENST00000300933 TDRD7Q8NHU6 1098 aaKnown RBP25.24■■□□□ 1.63
TPM4-201ENST00000300933 DEXIO95424 95 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 VEGFAP15692 232 aaPredicted RBP25.23■■□□□ 1.63
TPM4-201ENST00000300933 USP5P45974 858 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 CABP5Q9NP86 173 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
TPM4-201ENST00000300933 PCDHB6Q9Y5E3 794 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 CCDC196A0A1B0GTZ2 297 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 GOLGA6L19H0YKK7 550 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 CMA1P23946 247 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 DDR1Q08345 913 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 SAFBQ15424 915 aaKnown RBP eCLIP25.23■■□□□ 1.63
TPM4-201ENST00000300933 NOM1Q5C9Z4 860 aaKnown RBP25.23■■□□□ 1.63
TPM4-201ENST00000300933 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 KIAA1468Q9P260 1216 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 XDHP47989 1333 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 STK36Q9NRP7 1315 aa25.23■■□□□ 1.63
TPM4-201ENST00000300933 BECN2A8MW95 431 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 TROAPQ12815 778 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 AOPEPQ8N6M6 819 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 SLC44A5Q8NCS7 719 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 TGFBRAP1Q8WUH2 860 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 TSPY2A6NKD2 308 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 EARS2Q5JPH6 523 aaKnown RBP25.22■■□□□ 1.63
TPM4-201ENST00000300933 ZNF771Q7L3S4 317 aaPredicted RBP25.22■■□□□ 1.63
TPM4-201ENST00000300933 PROM2Q8N271 834 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 WASF1Q92558 559 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 LY75O60449 1722 aa25.22■■□□□ 1.63
TPM4-201ENST00000300933 SYKP43405 635 aa25.21■■□□□ 1.63
TPM4-201ENST00000300933 ZNF75DP51815 510 aa25.21■■□□□ 1.63
TPM4-201ENST00000300933 AKAP17AQ02040 695 aaKnown RBP25.21■■□□□ 1.63
TPM4-201ENST00000300933 PKN1Q16512 942 aa25.21■■□□□ 1.63
TPM4-201ENST00000300933 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.21■■□□□ 1.632e-6■■■■■ 29.8
TPM4-201ENST00000300933 SLC3A2P08195 630 aaKnown RBP25.21■■□□□ 1.63
TPM4-201ENST00000300933 DHX40Q8IX18 779 aaKnown RBP25.21■■□□□ 1.63
TPM4-201ENST00000300933 LEMD3Q9Y2U8 911 aa25.21■■□□□ 1.63
TPM4-201ENST00000300933 TNNT1P13805 278 aa25.2■■□□□ 1.63
TPM4-201ENST00000300933 MAPKAPK5Q8IW41 473 aa25.2■■□□□ 1.63
TPM4-201ENST00000300933 ATP8A2Q9NTI2 1148 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 ANO10Q9NW15 660 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 DUOX1Q9NRD9 1551 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 FUT2Q10981 343 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 KRT27Q7Z3Y8 459 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 ZNF592Q92610 1267 aa25.2■■□□□ 1.62
TPM4-201ENST00000300933 ST5P78524 1137 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 PNOCQ13519 176 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 POLLQ9UGP5 575 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 FOXN1O15353 648 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 TFAP4Q01664 338 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 LONRF3Q496Y0 759 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 ZNF804AQ7Z570 1209 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 KLHL34Q8N239 644 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 SRBD1Q8N5C6 995 aaKnown RBP25.19■■□□□ 1.62
TPM4-201ENST00000300933 CD209Q9NNX6 404 aa25.19■■□□□ 1.62
TPM4-201ENST00000300933 USP17L3A6NCW0 530 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 USP17L4A6NCW7 530 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 C6orf229H3BNL8 230 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 RIMBP2O15034 1052 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 FGRP09769 529 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 PLCD1P51178 756 aa25.18■■□□□ 1.62
TPM4-201ENST00000300933 ZRSR1Q15695 479 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms